Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 APOOP4-201ENST00000513530 597 ntBASIC3.81□□□□□ -1.8
CCNT1O60563 MIR2276-201ENST00000516886 89 ntBASIC3.81□□□□□ -1.8
CCNT1O60563 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.81□□□□□ -1.8
CCNT1O60563 MTCYBP20-201ENST00000524239 1129 ntBASIC3.81□□□□□ -1.8
CCNT1O60563 AC125611.2-201ENST00000551907 647 ntBASIC3.81□□□□□ -1.8
CCNT1O60563 AC011611.1-201ENST00000552179 197 ntBASIC3.81□□□□□ -1.8
CCNT1O60563 SETP2-201ENST00000553886 926 ntBASIC3.81□□□□□ -1.8
CCNT1O60563 AC005476.1-201ENST00000554427 397 ntBASIC3.81□□□□□ -1.8
CCNT1O60563 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.81□□□□□ -1.8
CCNT1O60563 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.81□□□□□ -1.8
CCNT1O60563 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.81□□□□□ -1.8
CCNT1O60563 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.81□□□□□ -1.8
CCNT1O60563 MIR4276-201ENST00000584832 70 ntBASIC3.81□□□□□ -1.8
CCNT1O60563 AC006254.3-201ENST00000603353 884 ntBASIC3.81□□□□□ -1.8
CCNT1O60563 AC080078.2-201ENST00000603766 501 ntBASIC3.81□□□□□ -1.8
CCNT1O60563 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.81□□□□□ -1.8
CCNT1O60563 AL590282.1-201ENST00000610379 1136 ntBASIC3.81□□□□□ -1.8
CCNT1O60563 AC087241.4-201ENST00000612441 480 ntBASIC3.81□□□□□ -1.8
CCNT1O60563 AC026585.1-201ENST00000619582 524 ntBASIC3.81□□□□□ -1.8
CCNT1O60563 AC009268.2-201ENST00000621925 457 ntBASIC3.81□□□□□ -1.8
CCNT1O60563 PISRT1-201ENST00000626175 531 ntBASIC3.81□□□□□ -1.8
CCNT1O60563 PWAR6-201ENST00000552334 4618 ntBASIC3.81□□□□□ -1.8
CCNT1O60563 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCNT1O60563 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.81□□□□□ -1.8
CCNT1O60563 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.81□□□□□ -1.8
CCNT1O60563 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCNT1O60563 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CCNT1O60563 AC017071.1-201ENST00000564407 2204 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.8□□□□□ -1.8
CCNT1O60563 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.8□□□□□ -1.8
CCNT1O60563 RN7SKP226-201ENST00000364912 300 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.8□□□□□ -1.8
CCNT1O60563 RNU6-1074P-201ENST00000383995 104 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 RNU6-259P-201ENST00000383999 107 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 RNU6-1042P-201ENST00000384204 107 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 RNU6-1215P-201ENST00000384441 102 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CCNT1O60563 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCNT1O60563 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.8□□□□□ -1.8
CCNT1O60563 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCNT1O60563 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNT1O60563 RPS15AP12-201ENST00000419498 388 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 BEND7P1-201ENST00000422058 457 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.8□□□□□ -1.8
CCNT1O60563 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.8□□□□□ -1.8
CCNT1O60563 AC097713.2-201ENST00000430199 356 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 RPL31P35-201ENST00000431058 377 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 TIMM9P1-201ENST00000436122 256 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 AC005019.1-201ENST00000436455 431 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.8□□□□□ -1.8
CCNT1O60563 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNT1O60563 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNT1O60563 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.8□□□□□ -1.8
CCNT1O60563 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.8□□□□□ -1.8
CCNT1O60563 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNT1O60563 AC010285.1-201ENST00000470580 392 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 AC078785.3-201ENST00000476607 425 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 AC010587.1-201ENST00000505809 469 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNT1O60563 RNU6-1220P-201ENST00000517126 108 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 AC016957.1-201ENST00000534895 309 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNT1O60563 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNT1O60563 NCAPGP2-201ENST00000557911 754 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.8□□□□□ -1.8
CCNT1O60563 MIR5047-201ENST00000579212 100 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 MIR3146-201ENST00000580367 79 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNT1O60563 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNT1O60563 AC025165.5-201ENST00000602802 578 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 AC011468.4-201ENST00000603942 409 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 AC007038.2-201ENST00000608095 740 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.8□□□□□ -1.8
CCNT1O60563 AL356321.1-201ENST00000621360 228 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 AL359740.1-201ENST00000624340 592 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCNT1O60563 MTND5P26-201ENST00000426018 1752 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 FARSBP1-201ENST00000435808 1778 ntBASIC3.8□□□□□ -1.8
CCNT1O60563 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCNT1O60563 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCNT1O60563 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCNT1O60563 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCNT1O60563 GABPAP-201ENST00000419271 1356 ntBASIC3.79□□□□□ -1.8
CCNT1O60563 AL138713.1-201ENST00000624026 2130 ntBASIC3.79□□□□□ -1.8
CCNT1O60563 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCNT1O60563 Y_RNA.582-201ENST00000391023 95 ntBASIC3.79□□□□□ -1.8
CCNT1O60563 RPS3AP24-201ENST00000407896 734 ntBASIC3.79□□□□□ -1.8
CCNT1O60563 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.79□□□□□ -1.8
CCNT1O60563 C8orf59P1-201ENST00000429930 303 ntBASIC3.79□□□□□ -1.8
CCNT1O60563 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.79□□□□□ -1.8
CCNT1O60563 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.79□□□□□ -1.8
CCNT1O60563 AC079448.1-201ENST00000449377 373 ntBASIC3.79□□□□□ -1.8
CCNT1O60563 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.79□□□□□ -1.8
CCNT1O60563 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.79□□□□□ -1.8
CCNT1O60563 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.79□□□□□ -1.8
CCNT1O60563 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.79□□□□□ -1.8
CCNT1O60563 HMGB1P22-201ENST00000505315 124 ntBASIC3.79□□□□□ -1.8
CCNT1O60563 ARL2BPP6-201ENST00000512757 439 ntBASIC3.79□□□□□ -1.8
CCNT1O60563 NDUFB9P3-201ENST00000521269 501 ntBASIC3.79□□□□□ -1.8
CCNT1O60563 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms