Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC093392.2-201ENST00000450682 337 ntBASIC2.82□□□□□ -1.96
MSH4O15457 AC133134.1-201ENST00000466800 359 ntBASIC2.82□□□□□ -1.96
MSH4O15457 RPL30P14-201ENST00000482744 348 ntBASIC2.82□□□□□ -1.96
MSH4O15457 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.82□□□□□ -1.96
MSH4O15457 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.82□□□□□ -1.96
MSH4O15457 AC109464.2-201ENST00000510242 943 ntBASIC2.82□□□□□ -1.96
MSH4O15457 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.82□□□□□ -1.96
MSH4O15457 RNU6-528P-201ENST00000516926 100 ntBASIC2.82□□□□□ -1.96
MSH4O15457 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
MSH4O15457 AC109329.2-201ENST00000519658 482 ntBASIC2.82□□□□□ -1.96
MSH4O15457 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.82□□□□□ -1.96
MSH4O15457 DEFB108D-201ENST00000527787 222 ntBASIC2.82□□□□□ -1.96
MSH4O15457 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.82□□□□□ -1.96
MSH4O15457 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.82□□□□□ -1.96
MSH4O15457 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
MSH4O15457 OR7K1P-201ENST00000546439 926 ntBASIC2.82□□□□□ -1.96
MSH4O15457 OR6C7P-201ENST00000547875 934 ntBASIC2.82□□□□□ -1.96
MSH4O15457 AC027807.1-201ENST00000559921 996 ntBASIC2.82□□□□□ -1.96
MSH4O15457 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.82□□□□□ -1.96
MSH4O15457 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.82□□□□□ -1.96
MSH4O15457 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.82□□□□□ -1.96
MSH4O15457 MIR5092-201ENST00000583139 88 ntBASIC2.82□□□□□ -1.96
MSH4O15457 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.82□□□□□ -1.96
MSH4O15457 AC006270.3-201ENST00000605967 1036 ntBASIC2.82□□□□□ -1.96
MSH4O15457 AC026790.2-201ENST00000606282 430 ntBASIC2.82□□□□□ -1.96
MSH4O15457 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.82□□□□□ -1.96
MSH4O15457 MIR6076-201ENST00000617521 113 ntBASIC2.82□□□□□ -1.96
MSH4O15457 AC103798.2-201ENST00000624292 632 ntBASIC2.82□□□□□ -1.96
MSH4O15457 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.82□□□□□ -1.96
MSH4O15457 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.82□□□□□ -1.96
MSH4O15457 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.82□□□□□ -1.96
MSH4O15457 AC011460.1-201ENST00000636268 1834 ntBASIC2.82□□□□□ -1.96
MSH4O15457 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
MSH4O15457 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
MSH4O15457 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
MSH4O15457 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
MSH4O15457 RNA5SP456-201ENST00000364002 114 ntBASIC2.81□□□□□ -1.96
MSH4O15457 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.81□□□□□ -1.96
MSH4O15457 MIR592-201ENST00000384959 97 ntBASIC2.81□□□□□ -1.96
MSH4O15457 HSPE1P1-201ENST00000421494 318 ntBASIC2.81□□□□□ -1.96
MSH4O15457 AL953862.1-201ENST00000423016 168 ntBASIC2.81□□□□□ -1.96
MSH4O15457 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
MSH4O15457 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.81□□□□□ -1.96
MSH4O15457 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.81□□□□□ -1.96
MSH4O15457 YWHAZP7-201ENST00000436906 631 ntBASIC2.81□□□□□ -1.96
MSH4O15457 AC004854.1-201ENST00000440356 349 ntBASIC2.81□□□□□ -1.96
MSH4O15457 RPL26P6-201ENST00000440913 438 ntBASIC2.81□□□□□ -1.96
MSH4O15457 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.81□□□□□ -1.96
MSH4O15457 AL513328.1-201ENST00000446460 224 ntBASIC2.81□□□□□ -1.96
MSH4O15457 AL590664.1-201ENST00000448065 339 ntBASIC2.81□□□□□ -1.96
MSH4O15457 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.81□□□□□ -1.96
MSH4O15457 AL009048.1-201ENST00000450437 298 ntBASIC2.81□□□□□ -1.96
MSH4O15457 GSTA11P-201ENST00000452866 669 ntBASIC2.81□□□□□ -1.96
MSH4O15457 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
MSH4O15457 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
MSH4O15457 AL359273.1-201ENST00000510918 627 ntBASIC2.81□□□□□ -1.96
MSH4O15457 SNORA31.1-201ENST00000515993 133 ntBASIC2.81□□□□□ -1.96
MSH4O15457 SNORA31.5-201ENST00000516190 133 ntBASIC2.81□□□□□ -1.96
MSH4O15457 RN7SKP282-201ENST00000516824 299 ntBASIC2.81□□□□□ -1.96
MSH4O15457 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.81□□□□□ -1.96
MSH4O15457 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.81□□□□□ -1.96
MSH4O15457 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.81□□□□□ -1.96
MSH4O15457 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.81□□□□□ -1.96
MSH4O15457 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.81□□□□□ -1.96
MSH4O15457 AC009097.3-201ENST00000563557 1018 ntBASIC2.81□□□□□ -1.96
MSH4O15457 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
MSH4O15457 AC009712.1-201ENST00000564938 316 ntBASIC2.81□□□□□ -1.96
MSH4O15457 AC105224.1-201ENST00000587055 421 ntBASIC2.81□□□□□ -1.96
MSH4O15457 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.81□□□□□ -1.96
MSH4O15457 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.81□□□□□ -1.96
MSH4O15457 AC011451.2-201ENST00000604303 598 ntBASIC2.81□□□□□ -1.96
MSH4O15457 AC007621.1-201ENST00000604544 437 ntBASIC2.81□□□□□ -1.96
MSH4O15457 AP000254.1-201ENST00000609934 520 ntBASIC2.81□□□□□ -1.96
MSH4O15457 AC245297.2-201ENST00000610119 565 ntBASIC2.81□□□□□ -1.96
MSH4O15457 BX664608.1-201ENST00000610519 487 ntBASIC2.81□□□□□ -1.96
MSH4O15457 AL450472.3-201ENST00000615578 367 ntBASIC2.81□□□□□ -1.96
MSH4O15457 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.81□□□□□ -1.96
MSH4O15457 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.81□□□□□ -1.96
MSH4O15457 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.81□□□□□ -1.96
MSH4O15457 MTCO1P9-201ENST00000505577 1534 ntBASIC2.81□□□□□ -1.96
MSH4O15457 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.8□□□□□ -1.96
MSH4O15457 AC106754.1-201ENST00000562632 1513 ntBASIC2.8□□□□□ -1.96
MSH4O15457 RNU4-82P-201ENST00000362443 140 ntBASIC2.8□□□□□ -1.96
MSH4O15457 RNU4-92P-201ENST00000363783 136 ntBASIC2.8□□□□□ -1.96
MSH4O15457 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.8□□□□□ -1.96
MSH4O15457 XGY1-201ENST00000381172 446 ntBASIC2.8□□□□□ -1.96
MSH4O15457 RNU6-636P-201ENST00000384598 107 ntBASIC2.8□□□□□ -1.96
MSH4O15457 Y_RNA.548-201ENST00000384656 105 ntBASIC2.8□□□□□ -1.96
MSH4O15457 SNORA1.3-201ENST00000384676 136 ntBASIC2.8□□□□□ -1.96
MSH4O15457 RNU6-1242P-201ENST00000391052 103 ntBASIC2.8□□□□□ -1.96
MSH4O15457 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.8□□□□□ -1.96
MSH4O15457 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.8□□□□□ -1.96
MSH4O15457 FCF1P1-201ENST00000432690 571 ntBASIC2.8□□□□□ -1.96
MSH4O15457 SETP8-201ENST00000435341 628 ntBASIC2.8□□□□□ -1.96
MSH4O15457 RPS25P9-201ENST00000435591 252 ntBASIC2.8□□□□□ -1.96
MSH4O15457 NDUFB4P6-201ENST00000436819 366 ntBASIC2.8□□□□□ -1.96
MSH4O15457 MTND5P14-201ENST00000441481 1267 ntBASIC2.8□□□□□ -1.96
MSH4O15457 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.8□□□□□ -1.96
MSH4O15457 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.8□□□□□ -1.96
MSH4O15457 AL049714.1-201ENST00000466686 347 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms