Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2□□□□□ -2.09
UBFD1O14562 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC2□□□□□ -2.09
UBFD1O14562 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2□□□□□ -2.09
UBFD1O14562 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2□□□□□ -2.09
UBFD1O14562 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2□□□□□ -2.09
UBFD1O14562 AP001804.3-201ENST00000525146 880 ntBASIC2□□□□□ -2.09
UBFD1O14562 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2□□□□□ -2.09
UBFD1O14562 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2□□□□□ -2.09
UBFD1O14562 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2□□□□□ -2.09
UBFD1O14562 YWHAZP1-201ENST00000556286 722 ntBASIC2□□□□□ -2.09
UBFD1O14562 RPS3AP23-202ENST00000574601 686 ntBASIC2□□□□□ -2.09
UBFD1O14562 LARP7P2-201ENST00000575306 125 ntBASIC2□□□□□ -2.09
UBFD1O14562 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2□□□□□ -2.09
UBFD1O14562 AC009314.1-201ENST00000603871 304 ntBASIC2□□□□□ -2.09
UBFD1O14562 AL022099.1-201ENST00000604551 712 ntBASIC2□□□□□ -2.09
UBFD1O14562 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2□□□□□ -2.09
UBFD1O14562 AC020658.4-201ENST00000613987 684 ntBASIC2□□□□□ -2.09
UBFD1O14562 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2□□□□□ -2.09
UBFD1O14562 ATP8A2P3-201ENST00000426792 1536 ntBASIC2□□□□□ -2.09
UBFD1O14562 MTND4P35-201ENST00000604257 1375 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
UBFD1O14562 MIR16-2-201ENST00000362117 81 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
UBFD1O14562 RNU6-657P-201ENST00000383904 107 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 RNU6-482P-201ENST00000391068 107 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 MIR1289-2-201ENST00000408360 111 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 RNU4-26P-201ENST00000410270 107 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 AL133384.1-201ENST00000412744 351 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.99□□□□□ -2.09
UBFD1O14562 RPL7P30-201ENST00000420888 709 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 SFR1P2-201ENST00000421841 730 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.99□□□□□ -2.09
UBFD1O14562 AC027124.2-201ENST00000428249 105 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.99□□□□□ -2.09
UBFD1O14562 AL589880.1-201ENST00000448271 287 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.99□□□□□ -2.09
UBFD1O14562 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.99□□□□□ -2.09
UBFD1O14562 AC010099.1-201ENST00000455434 375 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 snoU109.4-201ENST00000458953 143 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
UBFD1O14562 AC006390.1-201ENST00000508068 283 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.99□□□□□ -2.09
UBFD1O14562 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
UBFD1O14562 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.99□□□□□ -2.09
UBFD1O14562 OR5AK1P-201ENST00000524837 922 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 CASP1P1-201ENST00000526345 212 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.99□□□□□ -2.09
UBFD1O14562 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.99□□□□□ -2.09
UBFD1O14562 AC015712.3-201ENST00000559380 164 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 AC026464.5-201ENST00000562497 722 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 AC002984.1-201ENST00000591692 448 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.99□□□□□ -2.09
UBFD1O14562 AC100814.1-201ENST00000606963 623 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 AL138880.2-201ENST00000616214 239 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 AC010378.1-201ENST00000619270 362 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 AL356266.1-201ENST00000623311 483 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 AL118508.4-201ENST00000624142 1176 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 HPVC1-201ENST00000629899 1198 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 AC026634.1-201ENST00000634369 198 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
UBFD1O14562 AC090740.1-201ENST00000623193 2262 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.99□□□□□ -2.09
UBFD1O14562 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
UBFD1O14562 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
UBFD1O14562 AC009487.4-201ENST00000624969 3585 ntBASIC1.99□□□□□ -2.09
UBFD1O14562 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
UBFD1O14562 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
UBFD1O14562 AL596028.1-201ENST00000326971 197 ntBASIC1.98□□□□□ -2.09
UBFD1O14562 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.98□□□□□ -2.09
UBFD1O14562 SNORA1.3-201ENST00000384676 136 ntBASIC1.98□□□□□ -2.09
UBFD1O14562 SNORA11.4-201ENST00000408823 129 ntBASIC1.98□□□□□ -2.09
UBFD1O14562 RNU2-47P-201ENST00000410649 186 ntBASIC1.98□□□□□ -2.09
UBFD1O14562 AC096533.1-201ENST00000411645 353 ntBASIC1.98□□□□□ -2.09
UBFD1O14562 TAF13P2-201ENST00000416876 286 ntBASIC1.98□□□□□ -2.09
UBFD1O14562 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.98□□□□□ -2.09
UBFD1O14562 RAC1P8-201ENST00000427086 527 ntBASIC1.98□□□□□ -2.09
UBFD1O14562 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.98□□□□□ -2.09
UBFD1O14562 HMGN2P3-201ENST00000433603 273 ntBASIC1.98□□□□□ -2.09
UBFD1O14562 HMGN2P5-201ENST00000436882 273 ntBASIC1.98□□□□□ -2.09
UBFD1O14562 AL121871.1-201ENST00000443413 436 ntBASIC1.98□□□□□ -2.09
UBFD1O14562 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.98□□□□□ -2.09
UBFD1O14562 CBWD4P-201ENST00000445695 655 ntBASIC1.98□□□□□ -2.09
UBFD1O14562 RPL7P55-201ENST00000450522 746 ntBASIC1.98□□□□□ -2.09
UBFD1O14562 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.98□□□□□ -2.09
UBFD1O14562 MTCO3P11-201ENST00000455103 774 ntBASIC1.98□□□□□ -2.09
UBFD1O14562 MTND2P30-201ENST00000456663 382 ntBASIC1.98□□□□□ -2.09
UBFD1O14562 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.98□□□□□ -2.09
UBFD1O14562 RPL21P99-201ENST00000480369 423 ntBASIC1.98□□□□□ -2.09
UBFD1O14562 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.98□□□□□ -2.09
UBFD1O14562 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.98□□□□□ -2.09
UBFD1O14562 AC026616.1-201ENST00000523157 525 ntBASIC1.98□□□□□ -2.09
UBFD1O14562 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.98□□□□□ -2.09
UBFD1O14562 AP000867.2-201ENST00000532468 320 ntBASIC1.98□□□□□ -2.09
UBFD1O14562 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.98□□□□□ -2.09
UBFD1O14562 AC011611.5-201ENST00000552477 578 ntBASIC1.98□□□□□ -2.09
UBFD1O14562 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
UBFD1O14562 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.98□□□□□ -2.09
UBFD1O14562 MIR203B-201ENST00000636080 86 ntBASIC1.98□□□□□ -2.09
UBFD1O14562 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
UBFD1O14562 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms