Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNU2-64P-201ENST00000411315 191 ntBASIC5.12□□□□□ -1.59
SOX1O00570 REREP1Y-201ENST00000422655 198 ntBASIC5.12□□□□□ -1.59
SOX1O00570 AL645608.4-201ENST00000423619 154 ntBASIC5.12□□□□□ -1.59
SOX1O00570 RPL30P3-201ENST00000424262 333 ntBASIC5.12□□□□□ -1.59
SOX1O00570 REREP2Y-201ENST00000439103 200 ntBASIC5.12□□□□□ -1.59
SOX1O00570 AC000111.2-201ENST00000448200 210 ntBASIC5.12□□□□□ -1.59
SOX1O00570 AC084198.1-201ENST00000477747 402 ntBASIC5.12□□□□□ -1.59
SOX1O00570 AL132838.2-201ENST00000492041 314 ntBASIC5.12□□□□□ -1.59
SOX1O00570 RPL7P23-201ENST00000493874 747 ntBASIC5.12□□□□□ -1.59
SOX1O00570 VN1R104P-201ENST00000505115 1009 ntBASIC5.12□□□□□ -1.59
SOX1O00570 AC005798.1-201ENST00000513715 387 ntBASIC5.12□□□□□ -1.59
SOX1O00570 RN7SKP40-201ENST00000517211 242 ntBASIC5.12□□□□□ -1.59
SOX1O00570 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SOX1O00570 IGKV2D-36-201ENST00000518643 226 ntBASIC5.12□□□□□ -1.59
SOX1O00570 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.12□□□□□ -1.59
SOX1O00570 AC025423.5-201ENST00000550230 219 ntBASIC5.12□□□□□ -1.59
SOX1O00570 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SOX1O00570 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.12□□□□□ -1.59
SOX1O00570 AC012442.3-202ENST00000636742 206 ntBASIC5.12□□□□□ -1.59
SOX1O00570 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SOX1O00570 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.12□□□□□ -1.59
SOX1O00570 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.12□□□□□ -1.59
SOX1O00570 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
SOX1O00570 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SOX1O00570 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SOX1O00570 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SOX1O00570 EIF2AP4-201ENST00000424793 1781 ntBASIC5.11□□□□□ -1.59
SOX1O00570 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SOX1O00570 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.11□□□□□ -1.59
SOX1O00570 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
SOX1O00570 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
SOX1O00570 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SOX1O00570 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SOX1O00570 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
SOX1O00570 SNORD14.1-201ENST00000365609 90 ntBASIC5.11□□□□□ -1.59
SOX1O00570 RNU6-209P-201ENST00000384118 107 ntBASIC5.11□□□□□ -1.59
SOX1O00570 RNU6-713P-201ENST00000384761 107 ntBASIC5.11□□□□□ -1.59
SOX1O00570 MIR659-201ENST00000384963 97 ntBASIC5.11□□□□□ -1.59
SOX1O00570 SNORA48.4-201ENST00000391089 134 ntBASIC5.11□□□□□ -1.59
SOX1O00570 AC096664.2-201ENST00000411843 406 ntBASIC5.11□□□□□ -1.59
SOX1O00570 PGBD4P6-201ENST00000421501 610 ntBASIC5.11□□□□□ -1.59
SOX1O00570 UBE2V1P4-201ENST00000425374 344 ntBASIC5.11□□□□□ -1.59
SOX1O00570 PSMA2P3-201ENST00000429685 675 ntBASIC5.11□□□□□ -1.59
SOX1O00570 RPS15AP10-201ENST00000432472 382 ntBASIC5.11□□□□□ -1.59
SOX1O00570 AC011816.1-201ENST00000441346 546 ntBASIC5.11□□□□□ -1.59
SOX1O00570 BX276092.4-201ENST00000452056 248 ntBASIC5.11□□□□□ -1.59
SOX1O00570 RN7SL810P-201ENST00000493031 276 ntBASIC5.11□□□□□ -1.59
SOX1O00570 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.11□□□□□ -1.59
SOX1O00570 AC114801.2-201ENST00000503825 781 ntBASIC5.11□□□□□ -1.59
SOX1O00570 AC092436.3-201ENST00000511788 257 ntBASIC5.11□□□□□ -1.59
SOX1O00570 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.11□□□□□ -1.59
SOX1O00570 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.11□□□□□ -1.59
SOX1O00570 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.11□□□□□ -1.59
SOX1O00570 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.11□□□□□ -1.59
SOX1O00570 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.11□□□□□ -1.59
SOX1O00570 RN7SL652P-201ENST00000577769 300 ntBASIC5.11□□□□□ -1.59
SOX1O00570 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.11□□□□□ -1.59
SOX1O00570 AC125232.2-201ENST00000592457 143 ntBASIC5.11□□□□□ -1.59
SOX1O00570 AC104763.2-201ENST00000604179 382 ntBASIC5.11□□□□□ -1.59
SOX1O00570 CR392039.5-201ENST00000623201 510 ntBASIC5.11□□□□□ -1.59
SOX1O00570 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
SOX1O00570 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SOX1O00570 AC015813.6-201ENST00000624409 5808 ntBASIC5.11□□□□□ -1.59
SOX1O00570 OR51H2P-202ENST00000641424 3046 ntBASIC5.11□□□□□ -1.59
SOX1O00570 AL359893.1-201ENST00000447628 1580 ntBASIC5.11□□□□□ -1.59
SOX1O00570 HSPA8P4-201ENST00000511877 1920 ntBASIC5.11□□□□□ -1.59
SOX1O00570 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.11□□□□□ -1.59
SOX1O00570 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.11□□□□□ -1.59
SOX1O00570 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SOX1O00570 OR14L1P-202ENST00000641545 3009 ntBASIC5.1□□□□□ -1.59
SOX1O00570 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SOX1O00570 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
SOX1O00570 AL355834.1-201ENST00000556602 3965 ntBASIC5.1□□□□□ -1.59
SOX1O00570 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
SOX1O00570 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SOX1O00570 Z95114.1-201ENST00000624264 14574 ntBASIC5.1□□□□□ -1.59
SOX1O00570 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SOX1O00570 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.1□□□□□ -1.59
SOX1O00570 Y_RNA.106-201ENST00000363189 100 ntBASIC5.1□□□□□ -1.59
SOX1O00570 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX1O00570 RNU6-842P-201ENST00000384269 107 ntBASIC5.1□□□□□ -1.59
SOX1O00570 MT-TC-201ENST00000387405 66 ntBASIC5.1□□□□□ -1.59
SOX1O00570 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SOX1O00570 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SOX1O00570 AC097374.1-203ENST00000400783 485 ntBASIC5.1□□□□□ -1.59
SOX1O00570 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SOX1O00570 TMSB10P2-201ENST00000416049 131 ntBASIC5.1□□□□□ -1.59
SOX1O00570 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.1□□□□□ -1.59
SOX1O00570 AC140479.3-201ENST00000418944 1126 ntBASIC5.1□□□□□ -1.59
SOX1O00570 MRPS18CP6-201ENST00000423587 223 ntBASIC5.1□□□□□ -1.59
SOX1O00570 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX1O00570 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX1O00570 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
SOX1O00570 LINC02210-201ENST00000444561 288 ntBASIC5.1□□□□□ -1.59
SOX1O00570 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.1□□□□□ -1.59
SOX1O00570 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX1O00570 HMGB1P25-201ENST00000468402 607 ntBASIC5.1□□□□□ -1.59
SOX1O00570 RPL31P60-201ENST00000478450 367 ntBASIC5.1□□□□□ -1.59
SOX1O00570 AC090151.1-201ENST00000520784 730 ntBASIC5.1□□□□□ -1.59
SOX1O00570 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms