Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CACNA1AO00555 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC1.38□□□□□ -2.19
CACNA1AO00555 SAR1AP4-201ENST00000429225 591 ntBASIC1.38□□□□□ -2.19
CACNA1AO00555 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.38□□□□□ -2.19
CACNA1AO00555 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CACNA1AO00555 AC107918.3-201ENST00000533272 382 ntBASIC1.38□□□□□ -2.19
CACNA1AO00555 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.38□□□□□ -2.19
CACNA1AO00555 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.38□□□□□ -2.19
CACNA1AO00555 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CACNA1AO00555 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CACNA1AO00555 MCTS2P-201ENST00000394552 546 ntBASIC1.38□□□□□ -2.19
CACNA1AO00555 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC1.38□□□□□ -2.19
CACNA1AO00555 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.38□□□□□ -2.19
CACNA1AO00555 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.38□□□□□ -2.19
CACNA1AO00555 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.38□□□□□ -2.19
CACNA1AO00555 AL162388.1-201ENST00000450912 352 ntBASIC1.38□□□□□ -2.19
CACNA1AO00555 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.38□□□□□ -2.19
CACNA1AO00555 AC245060.5-201ENST00000610778 3293 ntBASIC1.38□□□□□ -2.19
CACNA1AO00555 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CACNA1AO00555 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.38□□□□□ -2.19
CACNA1AO00555 RPL19P1-201ENST00000411635 428 ntBASIC1.37□□□□□ -2.19
CACNA1AO00555 MED14P1-201ENST00000430517 648 ntBASIC1.37□□□□□ -2.19
CACNA1AO00555 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.37□□□□□ -2.19
CACNA1AO00555 PGBD4P3-201ENST00000440731 581 ntBASIC1.37□□□□□ -2.19
CACNA1AO00555 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.37□□□□□ -2.19
CACNA1AO00555 AL049830.2-201ENST00000480072 201 ntBASIC1.37□□□□□ -2.19
CACNA1AO00555 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CACNA1AO00555 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CACNA1AO00555 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CACNA1AO00555 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CACNA1AO00555 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CACNA1AO00555 RNU6-758P-201ENST00000516292 89 ntBASIC1.37□□□□□ -2.19
CACNA1AO00555 RNU1-92P-201ENST00000517017 135 ntBASIC1.37□□□□□ -2.19
CACNA1AO00555 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
CACNA1AO00555 AC006254.3-201ENST00000603353 884 ntBASIC1.37□□□□□ -2.19
CACNA1AO00555 AC012493.3-201ENST00000604494 112 ntBASIC1.37□□□□□ -2.19
CACNA1AO00555 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.37□□□□□ -2.19
CACNA1AO00555 AL390240.1-201ENST00000612950 384 ntBASIC1.37□□□□□ -2.19
CACNA1AO00555 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.37□□□□□ -2.19
CACNA1AO00555 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CACNA1AO00555 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CACNA1AO00555 RNU6-328P-201ENST00000390887 106 ntBASIC1.37□□□□□ -2.19
CACNA1AO00555 AF274854.1-201ENST00000413236 615 ntBASIC1.37□□□□□ -2.19
CACNA1AO00555 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.37□□□□□ -2.19
CACNA1AO00555 AL161788.1-201ENST00000441805 169 ntBASIC1.37□□□□□ -2.19
CACNA1AO00555 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.37□□□□□ -2.19
CACNA1AO00555 SUMO2P4-201ENST00000504193 276 ntBASIC1.37□□□□□ -2.19
CACNA1AO00555 GOLGA5P1-201ENST00000507317 980 ntBASIC1.37□□□□□ -2.19
CACNA1AO00555 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC1.37□□□□□ -2.19
CACNA1AO00555 MIR4419B-201ENST00000577260 68 ntBASIC1.37□□□□□ -2.19
CACNA1AO00555 AC008163.1-202ENST00000636004 2889 ntBASIC1.37□□□□□ -2.19
CACNA1AO00555 RNU6-1126P-201ENST00000384002 107 ntBASIC1.36□□□□□ -2.19
CACNA1AO00555 MIR329-1-201ENST00000385028 80 ntBASIC1.36□□□□□ -2.19
CACNA1AO00555 RPS23P3-201ENST00000470993 430 ntBASIC1.36□□□□□ -2.19
CACNA1AO00555 AC012181.1-201ENST00000479895 423 ntBASIC1.36□□□□□ -2.19
CACNA1AO00555 MIR3670-2-201ENST00000582974 65 ntBASIC1.36□□□□□ -2.19
CACNA1AO00555 MIR3670-1-201ENST00000584160 65 ntBASIC1.36□□□□□ -2.19
CACNA1AO00555 MIR3670-3-201ENST00000584855 65 ntBASIC1.36□□□□□ -2.19
CACNA1AO00555 AC099778.2-201ENST00000610904 211 ntBASIC1.36□□□□□ -2.19
CACNA1AO00555 MIR3670-4-201ENST00000612260 65 ntBASIC1.36□□□□□ -2.19
CACNA1AO00555 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.36□□□□□ -2.19
CACNA1AO00555 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.36□□□□□ -2.19
CACNA1AO00555 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CACNA1AO00555 MIR329-2-201ENST00000385029 84 ntBASIC1.36□□□□□ -2.19
CACNA1AO00555 AL033519.2-201ENST00000403958 392 ntBASIC1.36□□□□□ -2.19
CACNA1AO00555 HMGN2P19-201ENST00000425149 265 ntBASIC1.36□□□□□ -2.19
CACNA1AO00555 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.36□□□□□ -2.19
CACNA1AO00555 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC1.36□□□□□ -2.19
CACNA1AO00555 AC090096.1-201ENST00000489168 390 ntBASIC1.36□□□□□ -2.19
CACNA1AO00555 RPS26P24-201ENST00000497656 331 ntBASIC1.36□□□□□ -2.19
CACNA1AO00555 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC1.36□□□□□ -2.19
CACNA1AO00555 RNA5SP384-201ENST00000516615 116 ntBASIC1.36□□□□□ -2.19
CACNA1AO00555 MIR3660-201ENST00000584845 100 ntBASIC1.36□□□□□ -2.19
CACNA1AO00555 GLUD1P4-201ENST00000590914 418 ntBASIC1.36□□□□□ -2.19
CACNA1AO00555 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
CACNA1AO00555 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC1.35□□□□□ -2.19
CACNA1AO00555 MIR365B-201ENST00000362317 111 ntBASIC1.35□□□□□ -2.19
CACNA1AO00555 RNU6-629P-201ENST00000384061 103 ntBASIC1.35□□□□□ -2.19
CACNA1AO00555 AC073310.1-201ENST00000423226 1033 ntBASIC1.35□□□□□ -2.19
CACNA1AO00555 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.35□□□□□ -2.19
CACNA1AO00555 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.35□□□□□ -2.19
CACNA1AO00555 AL357520.1-201ENST00000441557 453 ntBASIC1.35□□□□□ -2.19
CACNA1AO00555 RPL21P18-201ENST00000469899 480 ntBASIC1.35□□□□□ -2.19
CACNA1AO00555 RNA5SP385-201ENST00000515947 110 ntBASIC1.35□□□□□ -2.19
CACNA1AO00555 MIR4802-201ENST00000581881 80 ntBASIC1.35□□□□□ -2.19
CACNA1AO00555 Pinc.1-201ENST00000616452 154 ntBASIC1.35□□□□□ -2.19
CACNA1AO00555 uc_338.22-201ENST00000622722 187 ntBASIC1.35□□□□□ -2.19
CACNA1AO00555 AC010297.1-201ENST00000623948 149 ntBASIC1.35□□□□□ -2.19
CACNA1AO00555 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.35□□□□□ -2.19
CACNA1AO00555 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC1.35□□□□□ -2.19
CACNA1AO00555 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.35□□□□□ -2.19
CACNA1AO00555 RNA5SP368-201ENST00000364298 116 ntBASIC1.35□□□□□ -2.19
CACNA1AO00555 SNORA16.1-201ENST00000364597 132 ntBASIC1.35□□□□□ -2.19
CACNA1AO00555 AC234064.1-201ENST00000436312 247 ntBASIC1.35□□□□□ -2.19
CACNA1AO00555 AC090453.1-201ENST00000495560 436 ntBASIC1.35□□□□□ -2.19
CACNA1AO00555 AC121161.1-201ENST00000510606 652 ntBASIC1.35□□□□□ -2.19
CACNA1AO00555 Y_RNA.675-201ENST00000516389 149 ntBASIC1.35□□□□□ -2.19
CACNA1AO00555 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.35□□□□□ -2.19
CACNA1AO00555 MIR3186-201ENST00000577404 85 ntBASIC1.35□□□□□ -2.19
CACNA1AO00555 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms