Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AC097504.2-201ENST00000608088 454 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AC110792.4-201ENST00000609843 298 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AC024941.1-201ENST00000612250 334 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 Y_RNA.783-201ENST00000613546 102 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AC010678.1-201ENST00000614118 713 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 MIR6730-201ENST00000622213 67 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AL356118.1-201ENST00000635272 1078 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AC068620.4-201ENST00000636730 1182 ntBASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
CHKB-CPT1BH3BT56 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 SNORA70.2-201ENST00000364506 135 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 U3.13-201ENST00000364804 214 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AC008280.1-201ENST00000418851 412 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 HMGB1P49-201ENST00000418882 569 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AC244453.4-201ENST00000419150 388 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AC246680.2-201ENST00000422106 389 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 SLC44A3-AS1-205ENST00000424505 612 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AC244035.1-201ENST00000430042 390 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AL512844.2-201ENST00000433990 593 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AC018634.1-201ENST00000437554 401 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 BMI1P1-201ENST00000445879 941 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 HSPE1P24-201ENST00000450782 238 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 snoU109.4-201ENST00000458953 143 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AC114982.2-201ENST00000461396 358 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 HMGB1P47-201ENST00000511281 589 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 RNU6-202P-201ENST00000515998 96 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 C1DP5-201ENST00000525775 383 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 RANP3-201ENST00000530970 276 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 EEF1B2P4-201ENST00000551398 348 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 MIR4713-201ENST00000582691 75 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 HMGN2P15-201ENST00000585707 270 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 ELOCP29-201ENST00000588193 334 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 OR2AS2P-201ENST00000606902 342 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AC093732.2-201ENST00000607950 274 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AP001521.1-201ENST00000609150 300 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AC090132.2-201ENST00000615881 347 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AC010378.1-201ENST00000619270 362 ntBASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
CHKB-CPT1BH3BT56 AL161722.3-201ENST00000605789 2983 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 RNU6-338P-201ENST00000383888 105 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 RNU6-441P-201ENST00000384545 106 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 MIR218-1-201ENST00000384999 110 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 AC016769.3-201ENST00000396562 315 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 PTMAP2-201ENST00000397627 327 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 RNU2-52P-201ENST00000410680 190 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 AC023141.4-201ENST00000412031 328 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 OR4K6P-201ENST00000416478 897 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 AC063976.3-201ENST00000426849 329 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 AC044797.1-201ENST00000445744 679 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 MTCO1P48-201ENST00000448024 1096 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 C1DP3-201ENST00000455013 423 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 RPS20P24-201ENST00000457473 361 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 FO393415.2-201ENST00000480085 343 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 VPS26AP1-201ENST00000483197 979 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 AF213884.2-201ENST00000510417 903 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 Y_RNA.675-201ENST00000516389 149 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 RPL7P20-201ENST00000520308 745 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 HAUS1P3-201ENST00000523909 662 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 EMP1-206ENST00000537612 505 ntTSL 3 BASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 AC084033.1-201ENST00000550830 633 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 MIR3126-201ENST00000577443 74 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 MIR3198-2-201ENST00000577868 80 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 AC022069.1-201ENST00000582910 658 ntBASIC0.93□□□□□ -2.26
CHKB-CPT1BH3BT56 BNIP3P25-201ENST00000596023 559 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms