Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RNU6-583P-201ENST00000516012 92 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 RNA5SP282-201ENST00000516355 108 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 SNORA9.3-201ENST00000516383 129 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 RNA5SP148-201ENST00000516527 94 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 LRRC34P1-201ENST00000542742 915 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 DUXAP1-201ENST00000556632 463 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 AC090888.2-201ENST00000559765 1144 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 AC012182.1-201ENST00000570133 895 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 SNORD84-203ENST00000584275 78 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 AC022022.2-201ENST00000602989 360 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 AC019159.1-201ENST00000605094 187 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 MIR6715A-201ENST00000615929 79 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 AP000676.4-201ENST00000624659 623 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 CR381572.1-201ENST00000625098 102 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 MIR1322-201ENST00000638013 71 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 ZNF734P-201ENST00000419494 1534 ntBASIC2.57□□□□□ -2
TMX2-CTNND1H3BSU7 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 RNU6-1214P-201ENST00000363650 109 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 RNU6-335P-201ENST00000364563 113 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 RNU6-343P-201ENST00000364709 104 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 Y_RNA.311-201ENST00000365068 96 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 DEFA7P-201ENST00000382676 285 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 RNU6-629P-201ENST00000384061 103 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 DHFRP6-201ENST00000401776 268 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 PIGPP2-201ENST00000411569 458 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 TOMM22P1-201ENST00000418578 312 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 EZH2P1-201ENST00000431167 291 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 OR6K1P-201ENST00000456766 971 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 RPS3P1-201ENST00000456781 192 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 AL139824.2-201ENST00000458731 1095 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 RPS15AP17-201ENST00000470598 390 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 TMEM251P1-201ENST00000503717 318 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 RNA5SP468-201ENST00000516782 93 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 MTCYBP41-201ENST00000528913 1123 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 HSPE1P3-201ENST00000559254 309 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 AC087465.1-201ENST00000560574 245 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 AL669831.4-202ENST00000590817 238 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 AC097478.2-201ENST00000610572 514 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 AC140725.3-201ENST00000616193 880 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 AC021755.4-201ENST00000616620 456 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 AC009159.2-201ENST00000617603 606 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 AP001350.1-201ENST00000601906 1524 ntBASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
TMX2-CTNND1H3BSU7 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 RNU6-263P-201ENST00000363811 107 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 RNU1-109P-201ENST00000383960 147 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 SNRPEP2-201ENST00000397592 279 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 RPL19P1-201ENST00000411635 428 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 HIGD1AP15-201ENST00000416198 280 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 TIMM9P2-201ENST00000419324 266 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 MTCO2P21-201ENST00000419780 677 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 AC233728.2-201ENST00000425348 757 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 RPL21P66-201ENST00000426566 466 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 MYL8P-204ENST00000431574 518 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 AL121890.1-201ENST00000435457 205 ntBASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.55□□□□□ -2
TMX2-CTNND1H3BSU7 AL606662.1-201ENST00000445763 553 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms