Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CFAP99D6REC4 OR2AT2P-201ENST00000413438 905 ntBASIC5.66□□□□□ -1.5
CFAP99D6REC4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.66□□□□□ -1.5
CFAP99D6REC4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC5.66□□□□□ -1.5
CFAP99D6REC4 AC093655.2-201ENST00000425735 631 ntBASIC5.66□□□□□ -1.5
CFAP99D6REC4 CFL1P1-202ENST00000432948 411 ntBASIC5.66□□□□□ -1.5
CFAP99D6REC4 RPS20P1-201ENST00000434853 354 ntBASIC5.66□□□□□ -1.5
CFAP99D6REC4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.66□□□□□ -1.5
CFAP99D6REC4 RPL12P39-201ENST00000455456 496 ntBASIC5.66□□□□□ -1.5
CFAP99D6REC4 RPS29P26-201ENST00000477483 171 ntBASIC5.66□□□□□ -1.5
CFAP99D6REC4 MRPL42P6-201ENST00000486397 371 ntBASIC5.66□□□□□ -1.5
CFAP99D6REC4 RNU6-861P-201ENST00000516745 106 ntBASIC5.66□□□□□ -1.5
CFAP99D6REC4 IGKV2-38-201ENST00000517443 247 ntBASIC5.66□□□□□ -1.5
CFAP99D6REC4 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.66□□□□□ -1.5
CFAP99D6REC4 IGLV3-30-201ENST00000524362 298 ntBASIC5.66□□□□□ -1.5
CFAP99D6REC4 AC004024.1-201ENST00000549244 247 ntBASIC5.66□□□□□ -1.5
CFAP99D6REC4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.66□□□□□ -1.5
CFAP99D6REC4 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.66□□□□□ -1.5
CFAP99D6REC4 NDUFB4P11-201ENST00000560510 395 ntBASIC5.66□□□□□ -1.5
CFAP99D6REC4 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.66□□□□□ -1.5
CFAP99D6REC4 AC090617.3-201ENST00000573670 475 ntBASIC5.66□□□□□ -1.5
CFAP99D6REC4 FKBP1AP1-201ENST00000594588 318 ntBASIC5.66□□□□□ -1.5
CFAP99D6REC4 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CFAP99D6REC4 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.66□□□□□ -1.5
CFAP99D6REC4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CFAP99D6REC4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.66□□□□□ -1.5
CFAP99D6REC4 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.66□□□□□ -1.5
CFAP99D6REC4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CFAP99D6REC4 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.66□□□□□ -1.5
CFAP99D6REC4 GVINP1-202ENST00000531871 7271 ntBASIC5.66□□□□□ -1.5
CFAP99D6REC4 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CFAP99D6REC4 AL391684.1-202ENST00000641293 1636 ntBASIC5.66□□□□□ -1.5
CFAP99D6REC4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CFAP99D6REC4 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CFAP99D6REC4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CFAP99D6REC4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CFAP99D6REC4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
CFAP99D6REC4 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.65□□□□□ -1.5
CFAP99D6REC4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
CFAP99D6REC4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CFAP99D6REC4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.65□□□□□ -1.5
CFAP99D6REC4 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.65□□□□□ -1.5
CFAP99D6REC4 AL159987.1-201ENST00000347911 293 ntBASIC5.65□□□□□ -1.5
CFAP99D6REC4 RNU6-1020P-201ENST00000363684 107 ntBASIC5.65□□□□□ -1.5
CFAP99D6REC4 SNORD63-201ENST00000384262 68 ntBASIC5.65□□□□□ -1.5
CFAP99D6REC4 LAP3P1-201ENST00000403648 294 ntBASIC5.65□□□□□ -1.5
CFAP99D6REC4 Y_RNA.623-201ENST00000411128 95 ntBASIC5.65□□□□□ -1.5
CFAP99D6REC4 AL451074.5-201ENST00000415894 435 ntBASIC5.65□□□□□ -1.5
CFAP99D6REC4 AC017079.2-201ENST00000416102 485 ntBASIC5.65□□□□□ -1.5
CFAP99D6REC4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.65□□□□□ -1.5
CFAP99D6REC4 RPL21P40-201ENST00000428586 483 ntBASIC5.65□□□□□ -1.5
CFAP99D6REC4 AC099670.2-201ENST00000435130 321 ntBASIC5.65□□□□□ -1.5
CFAP99D6REC4 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.65□□□□□ -1.5
CFAP99D6REC4 RPS29P27-201ENST00000463711 170 ntBASIC5.65□□□□□ -1.5
CFAP99D6REC4 AC034236.1-201ENST00000469891 373 ntBASIC5.65□□□□□ -1.5
CFAP99D6REC4 DUTP1-201ENST00000493631 470 ntBASIC5.65□□□□□ -1.5
CFAP99D6REC4 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.65□□□□□ -1.5
CFAP99D6REC4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.65□□□□□ -1.5
CFAP99D6REC4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.65□□□□□ -1.5
CFAP99D6REC4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.65□□□□□ -1.5
CFAP99D6REC4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC5.65□□□□□ -1.5
CFAP99D6REC4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.65□□□□□ -1.5
CFAP99D6REC4 AC037487.3-201ENST00000606668 112 ntBASIC5.65□□□□□ -1.5
CFAP99D6REC4 AC005046.1-201ENST00000608515 625 ntBASIC5.65□□□□□ -1.5
CFAP99D6REC4 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.65□□□□□ -1.5
CFAP99D6REC4 SDR42E1P1-201ENST00000611327 477 ntBASIC5.65□□□□□ -1.5
CFAP99D6REC4 AL360181.4-201ENST00000621752 134 ntBASIC5.65□□□□□ -1.5
CFAP99D6REC4 AP001005.3-201ENST00000622049 129 ntBASIC5.65□□□□□ -1.5
CFAP99D6REC4 AC138965.3-201ENST00000623875 498 ntBASIC5.65□□□□□ -1.5
CFAP99D6REC4 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.65□□□□□ -1.5
CFAP99D6REC4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
CFAP99D6REC4 AC116096.1-201ENST00000566804 2314 ntBASIC5.65□□□□□ -1.51
CFAP99D6REC4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.65□□□□□ -1.51
CFAP99D6REC4 MAPK10-328ENST00000641553 4009 ntBASIC5.65□□□□□ -1.51
CFAP99D6REC4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CFAP99D6REC4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CFAP99D6REC4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CFAP99D6REC4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CFAP99D6REC4 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
CFAP99D6REC4 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CFAP99D6REC4 OR9K1P-202ENST00000641111 3217 ntBASIC5.64□□□□□ -1.51
CFAP99D6REC4 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
CFAP99D6REC4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CFAP99D6REC4 Y_RNA.76-201ENST00000362931 109 ntBASIC5.64□□□□□ -1.51
CFAP99D6REC4 RNU6-1074P-201ENST00000383995 104 ntBASIC5.64□□□□□ -1.51
CFAP99D6REC4 RNU6-356P-201ENST00000384140 107 ntBASIC5.64□□□□□ -1.51
CFAP99D6REC4 RNU6-937P-201ENST00000384325 106 ntBASIC5.64□□□□□ -1.51
CFAP99D6REC4 RNA5SP284-201ENST00000384547 118 ntBASIC5.64□□□□□ -1.51
CFAP99D6REC4 MIR34A-201ENST00000385130 110 ntBASIC5.64□□□□□ -1.51
CFAP99D6REC4 RNU6-493P-201ENST00000391321 108 ntBASIC5.64□□□□□ -1.51
CFAP99D6REC4 Y_RNA.626-201ENST00000411288 95 ntBASIC5.64□□□□□ -1.51
CFAP99D6REC4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.64□□□□□ -1.51
CFAP99D6REC4 RNF10P1-201ENST00000418589 369 ntBASIC5.64□□□□□ -1.51
CFAP99D6REC4 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.64□□□□□ -1.51
CFAP99D6REC4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.64□□□□□ -1.51
CFAP99D6REC4 TMEM183AP1-205ENST00000432739 290 ntBASIC5.64□□□□□ -1.51
CFAP99D6REC4 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CFAP99D6REC4 AL359073.1-201ENST00000448036 403 ntBASIC5.64□□□□□ -1.51
CFAP99D6REC4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.64□□□□□ -1.51
CFAP99D6REC4 AC109925.1-201ENST00000478069 331 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms