Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CNOT1A5YKK6 RNU6-198P-201ENST00000384258 104 ntBASIC1.39□□□□□ -2.19
CNOT1A5YKK6 TRGV6-201ENST00000417928 299 ntBASIC1.39□□□□□ -2.19
CNOT1A5YKK6 AC090453.1-201ENST00000495560 436 ntBASIC1.39□□□□□ -2.19
CNOT1A5YKK6 NOP56P3-201ENST00000549457 385 ntBASIC1.39□□□□□ -2.19
CNOT1A5YKK6 PRELID2P1-201ENST00000552837 301 ntBASIC1.39□□□□□ -2.19
CNOT1A5YKK6 MTND2P13-201ENST00000577438 1039 ntBASIC1.39□□□□□ -2.19
CNOT1A5YKK6 AP001180.3-201ENST00000582221 145 ntBASIC1.39□□□□□ -2.19
CNOT1A5YKK6 MIR6086-201ENST00000638065 55 ntBASIC1.39□□□□□ -2.19
CNOT1A5YKK6 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CNOT1A5YKK6 Y_RNA.85-201ENST00000363014 111 ntBASIC1.38□□□□□ -2.19
CNOT1A5YKK6 RNU6-716P-201ENST00000365621 103 ntBASIC1.38□□□□□ -2.19
CNOT1A5YKK6 AC093084.1-201ENST00000424233 687 ntBASIC1.38□□□□□ -2.19
CNOT1A5YKK6 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.38□□□□□ -2.19
CNOT1A5YKK6 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.38□□□□□ -2.19
CNOT1A5YKK6 RPL21P39-201ENST00000463605 483 ntBASIC1.38□□□□□ -2.19
CNOT1A5YKK6 RPL21P93-201ENST00000480465 489 ntBASIC1.38□□□□□ -2.19
CNOT1A5YKK6 AC233702.1-201ENST00000482905 502 ntBASIC1.38□□□□□ -2.19
CNOT1A5YKK6 AC087190.1-201ENST00000484462 480 ntBASIC1.38□□□□□ -2.19
CNOT1A5YKK6 AC093591.1-201ENST00000491435 481 ntBASIC1.38□□□□□ -2.19
CNOT1A5YKK6 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.38□□□□□ -2.19
CNOT1A5YKK6 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.38□□□□□ -2.19
CNOT1A5YKK6 AC024614.2-201ENST00000577584 372 ntBASIC1.38□□□□□ -2.19
CNOT1A5YKK6 MIR5694-201ENST00000581190 76 ntBASIC1.38□□□□□ -2.19
CNOT1A5YKK6 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.38□□□□□ -2.19
CNOT1A5YKK6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CNOT1A5YKK6 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CNOT1A5YKK6 RNU1-109P-201ENST00000383960 147 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 RNU2-25P-201ENST00000411041 191 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.37□□□□□ -2.19
CNOT1A5YKK6 HMGB1P45-201ENST00000435986 653 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.37□□□□□ -2.19
CNOT1A5YKK6 AC009901.1-201ENST00000506703 541 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 RN7SKP5-201ENST00000517045 272 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.37□□□□□ -2.19
CNOT1A5YKK6 AC087373.1-201ENST00000524920 491 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 YWHAQP7-201ENST00000603536 658 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.37□□□□□ -2.19
CNOT1A5YKK6 AC138915.1-201ENST00000565427 1685 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CNOT1A5YKK6 AC073264.1-201ENST00000411508 416 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 RPL31P35-201ENST00000431058 377 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 AL365400.1-201ENST00000431854 640 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 FTH1P12-201ENST00000432137 551 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 RAB9AP5-201ENST00000437794 597 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 RAB9AP2-201ENST00000443911 597 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 RBM43P1-201ENST00000476891 1081 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 AC008885.2-201ENST00000509506 930 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 SNORD59.2-201ENST00000516873 68 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC1.37□□□□□ -2.19
CNOT1A5YKK6 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.37□□□□□ -2.19
CNOT1A5YKK6 AL121839.1-201ENST00000556233 1185 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 AC091057.2-201ENST00000602594 792 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.37□□□□□ -2.19
CNOT1A5YKK6 AL138955.1-201ENST00000622881 1040 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 AC135776.4-201ENST00000624300 1904 ntBASIC1.37□□□□□ -2.19
CNOT1A5YKK6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CNOT1A5YKK6 RN7SKP200-201ENST00000410564 320 ntBASIC1.36□□□□□ -2.19
CNOT1A5YKK6 RNA5SP489-201ENST00000410986 109 ntBASIC1.36□□□□□ -2.19
CNOT1A5YKK6 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.36□□□□□ -2.19
CNOT1A5YKK6 AC109780.2-201ENST00000413467 845 ntBASIC1.36□□□□□ -2.19
CNOT1A5YKK6 AL445183.3-201ENST00000414168 502 ntBASIC1.36□□□□□ -2.19
CNOT1A5YKK6 RPS6P14-201ENST00000425165 719 ntBASIC1.36□□□□□ -2.19
CNOT1A5YKK6 AL358176.2-201ENST00000425769 204 ntBASIC1.36□□□□□ -2.19
CNOT1A5YKK6 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.36□□□□□ -2.19
CNOT1A5YKK6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CNOT1A5YKK6 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CNOT1A5YKK6 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.36□□□□□ -2.19
CNOT1A5YKK6 AL109653.1-201ENST00000603091 248 ntBASIC1.36□□□□□ -2.19
CNOT1A5YKK6 uc_338.12-201ENST00000616344 181 ntBASIC1.36□□□□□ -2.19
CNOT1A5YKK6 SNHG22-203ENST00000617833 660 ntBASIC1.36□□□□□ -2.19
CNOT1A5YKK6 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CNOT1A5YKK6 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CNOT1A5YKK6 U8.1-201ENST00000362843 134 ntBASIC1.36□□□□□ -2.19
CNOT1A5YKK6 RFESDP1-201ENST00000422350 461 ntBASIC1.36□□□□□ -2.19
CNOT1A5YKK6 HSFY3P-201ENST00000444242 1191 ntBASIC1.36□□□□□ -2.19
CNOT1A5YKK6 OR5H4P-201ENST00000510851 923 ntBASIC1.36□□□□□ -2.19
CNOT1A5YKK6 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CNOT1A5YKK6 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CNOT1A5YKK6 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.36□□□□□ -2.19
CNOT1A5YKK6 MIRLET7G-201ENST00000362280 84 ntBASIC1.35□□□□□ -2.19
CNOT1A5YKK6 BX682237.1-201ENST00000415016 335 ntBASIC1.35□□□□□ -2.19
CNOT1A5YKK6 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.35□□□□□ -2.19
CNOT1A5YKK6 ACTR3BP3-201ENST00000565577 979 ntBASIC1.35□□□□□ -2.19
CNOT1A5YKK6 AC023825.1-201ENST00000566704 1030 ntBASIC1.35□□□□□ -2.19
CNOT1A5YKK6 CUL4AP1-201ENST00000514750 1863 ntBASIC1.35□□□□□ -2.19
CNOT1A5YKK6 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
CNOT1A5YKK6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.35□□□□□ -2.19
CNOT1A5YKK6 HMGB3P2-201ENST00000411913 584 ntBASIC1.35□□□□□ -2.19
CNOT1A5YKK6 AC241520.1-201ENST00000422654 1099 ntBASIC1.35□□□□□ -2.19
CNOT1A5YKK6 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.35□□□□□ -2.19
CNOT1A5YKK6 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.35□□□□□ -2.19
CNOT1A5YKK6 AC104115.2-201ENST00000523026 687 ntBASIC1.35□□□□□ -2.19
CNOT1A5YKK6 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.35□□□□□ -2.19
CNOT1A5YKK6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.35□□□□□ -2.19
CNOT1A5YKK6 SYF2P1-201ENST00000550658 413 ntBASIC1.35□□□□□ -2.19
CNOT1A5YKK6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
CNOT1A5YKK6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.35□□□□□ -2.19
CNOT1A5YKK6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms