Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 RPS12P24-201ENST00000412619 387 ntBASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 ARL5AP1-201ENST00000418991 388 ntBASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 MTND4P28-201ENST00000426217 387 ntBASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 PRDX3P3-201ENST00000447765 522 ntBASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 AC104058.1-201ENST00000448028 297 ntBASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 RPS4XP13-201ENST00000483219 789 ntBASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 CCDC34P1-201ENST00000507441 517 ntBASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 AC098591.2-201ENST00000510152 315 ntBASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 AC112206.3-201ENST00000514578 389 ntBASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 RNU6-685P-201ENST00000517088 95 ntBASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 MIR4429-201ENST00000580105 73 ntBASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 MIR3690-201ENST00000580266 75 ntBASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 AC005498.1-201ENST00000592125 465 ntBASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 VN1R80P-201ENST00000597126 338 ntBASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 AC113403.1-201ENST00000604910 193 ntBASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 MIR8059-201ENST00000620427 81 ntBASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 AL133383.2-201ENST00000622958 2336 ntBASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
CCDC163A0A0D9SF12 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
CCDC163A0A0D9SF12 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 RNU6-1252P-201ENST00000363054 104 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 RNU4-73P-201ENST00000363164 141 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 RNU1-132P-201ENST00000364300 164 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 SNORD70.1-201ENST00000391007 85 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 ARL4AP5-201ENST00000404372 599 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 AL356432.1-201ENST00000405809 419 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 U3.35-201ENST00000408405 208 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 RN7SKP32-201ENST00000410167 303 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 AL513331.1-201ENST00000411908 397 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 E2F6P2-201ENST00000420708 748 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 RPL35AP21-201ENST00000437667 333 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 HMGB1P12-201ENST00000438594 598 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 MTND4LP16-201ENST00000440828 295 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 PRPS1P1-201ENST00000445305 876 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 MRPL50P4-201ENST00000446432 475 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 RPL31P60-201ENST00000478450 367 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 AC103851.1-201ENST00000506833 274 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 MTCO3P9-201ENST00000506989 781 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 TBCAP3-201ENST00000512475 312 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 RNU6-273P-201ENST00000516937 96 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 RNA5SP230-201ENST00000517039 122 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 AC090281.1-201ENST00000523019 276 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 AC026464.5-201ENST00000562497 722 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 RPL23AP87-202ENST00000573039 466 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 AC092747.3-201ENST00000603769 301 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 AC103710.2-202ENST00000641454 2853 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 ADAM5-202ENST00000399789 1942 ntBASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCDC163A0A0D9SF12 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 SPRR2C-201ENST00000290702 219 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms