Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC027807.1-201ENST00000559921 996 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AC034268.2-201ENST00000571784 482 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 MIR4999-201ENST00000585029 91 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AC011468.4-201ENST00000603942 409 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AC009220.3-201ENST00000604318 586 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AP001330.4-201ENST00000604350 154 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 DPRXP5-201ENST00000604662 539 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 MIR6817-201ENST00000615588 66 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AP002782.1-201ENST00000623107 614 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AC007490.1-201ENST00000624321 703 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AC120349.3-201ENST00000624377 529 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AC103706.2-201ENST00000638080 240 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AC092447.7-201ENST00000422212 1621 ntBASIC2.17□□□□□ -2.06
TRAV40A0A0B4J280 AL079343.1-201ENST00000572358 1771 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 SGO1P2-201ENST00000429458 1589 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AC005539.1-201ENST00000443768 1479 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AL390862.1-201ENST00000635467 1469 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 MTND4P16-201ENST00000466108 1367 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 RNU6-28P-201ENST00000362378 107 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 Y_RNA.234-201ENST00000364409 97 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 SNORA7.2-201ENST00000364446 145 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 RNU6-660P-201ENST00000364566 109 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 MIR607-201ENST00000385241 96 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AL590004.2-201ENST00000404787 371 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 MTATP6P27-201ENST00000416987 621 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 YPEL5P1-201ENST00000419731 367 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 RPL21P66-201ENST00000426566 466 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 MTCO1P27-201ENST00000448269 226 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 MTND2P19-201ENST00000449129 1012 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 RPL7P52-201ENST00000449200 742 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 EEF1B2P7-201ENST00000451177 676 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 SUMO2P2-201ENST00000456482 255 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 RPL9P33-201ENST00000484311 566 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 RNU6-826P-201ENST00000516827 104 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AP004242.1-201ENST00000533701 349 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 ELOCP31-201ENST00000540463 467 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 OR7K1P-201ENST00000546439 926 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AC011260.1-201ENST00000578420 472 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AC078899.3-201ENST00000599065 212 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 VN1R82P-201ENST00000601481 356 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AC007687.1-201ENST00000602704 304 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 BBIP1P1-201ENST00000602999 279 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AL596327.1-201ENST00000603629 213 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AC018714.1-201ENST00000605028 208 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AL592221.1-201ENST00000605266 382 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AC055876.5-201ENST00000605667 259 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AC007671.2-201ENST00000637344 619 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AC080100.1-201ENST00000624239 5356 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 ASNSP3-201ENST00000451989 1306 ntBASIC2.16□□□□□ -2.06
TRAV40A0A0B4J280 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.15□□□□□ -2.06
TRAV40A0A0B4J280 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
TRAV40A0A0B4J280 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.15□□□□□ -2.06
TRAV40A0A0B4J280 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 AL359693.1-201ENST00000614959 2407 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 RNU6-1155P-201ENST00000363554 107 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 RNU6-931P-201ENST00000363850 107 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 U3.12-201ENST00000364498 214 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 RNU6-301P-201ENST00000384277 107 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 HSPE1P26-201ENST00000405341 275 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 RAP1BP1-201ENST00000412709 553 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 EI24P1-201ENST00000416584 867 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms