Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CCDC61Q9Y6R9 AC100778.3-201ENST00000580060 1750 ntBASIC7.38□□□□□ -1.23
CCDC61Q9Y6R9 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CCDC61Q9Y6R9 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
CCDC61Q9Y6R9 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CCDC61Q9Y6R9 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC7.38□□□□□ -1.23
CCDC61Q9Y6R9 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CCDC61Q9Y6R9 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 AL589993.1-201ENST00000407450 2524 ntBASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 U3.6-201ENST00000363622 211 ntBASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 RNU6-76P-201ENST00000384060 104 ntBASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 AC063979.1-201ENST00000415539 377 ntBASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 WARS2P1-201ENST00000429678 537 ntBASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 AC016700.2-201ENST00000446011 156 ntBASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 IFNA11P-201ENST00000446352 526 ntBASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 TOMM22P6-201ENST00000465035 409 ntBASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 AC117440.1-201ENST00000474107 571 ntBASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 AC004980.4-201ENST00000513375 203 ntBASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 RNU5E-3P-201ENST00000515913 68 ntBASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 SUMO2P18-201ENST00000518873 252 ntBASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 RPL23AP87-202ENST00000573039 466 ntBASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 BPIFA4P-203ENST00000603168 689 ntBASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 AL034351.1-201ENST00000605288 668 ntBASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 AC027228.2-201ENST00000567141 2154 ntBASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC61Q9Y6R9 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 MTND5P32-201ENST00000560711 1802 ntBASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 RN7SKP103-201ENST00000363848 320 ntBASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 RNU6-211P-201ENST00000384047 107 ntBASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 RNU6-729P-201ENST00000384399 107 ntBASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 TBCAP2-201ENST00000416175 326 ntBASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 AC099677.1-201ENST00000420575 175 ntBASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 HMGB1P27-201ENST00000431429 603 ntBASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 AC006466.1-201ENST00000438721 289 ntBASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 RN7SL188P-201ENST00000469842 285 ntBASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 RPL23AP2-201ENST00000471227 466 ntBASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 MIR4480-201ENST00000582492 71 ntBASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 SNORD91B-202ENST00000608459 222 ntBASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.36□□□□□ -1.23
CCDC61Q9Y6R9 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 AC000374.1-201ENST00000434698 1745 ntBASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 SNURFL-201ENST00000309296 343 ntBASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 RNU6-827P-201ENST00000365553 106 ntBASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 SNORA51.8-201ENST00000384234 132 ntBASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 FCF1P8-201ENST00000510322 597 ntBASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 RNA5SP76-201ENST00000516277 87 ntBASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 DNAJC19P2-201ENST00000593340 302 ntBASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 RMST_4.1-201ENST00000616886 107 ntBASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 AC006001.4-201ENST00000622243 395 ntBASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 AL596275.2-208ENST00000641192 594 ntBASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 AL137141.1-201ENST00000624622 4836 ntBASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
CCDC61Q9Y6R9 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 AC138907.8-201ENST00000623981 2256 ntBASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 AL034549.2-201ENST00000618285 3373 ntBASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 RNU6-199P-201ENST00000362954 107 ntBASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 RNA5SP123-201ENST00000363244 119 ntBASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 RNU6-879P-201ENST00000364328 108 ntBASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 RNU4-17P-201ENST00000365598 141 ntBASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 SNORA56-201ENST00000383966 129 ntBASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 RPS4XP3-201ENST00000398541 413 ntBASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms