Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC093663.1-201ENST00000497190 394 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 TXNP6-201ENST00000510190 310 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 SNORA70.19-201ENST00000516717 90 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 RN7SKP289-201ENST00000517244 295 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 AP002453.2-201ENST00000533503 320 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 BNIP3P8-201ENST00000597863 560 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 AC090578.1-201ENST00000604955 591 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 XIST_intron.1-201ENST00000619444 68 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 AC091152.2-201ENST00000591628 2569 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 AL672296.1-201ENST00000427780 2158 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 AC138915.3-201ENST00000562908 1389 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 MIR208A-201ENST00000362287 71 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 Y_RNA.46-201ENST00000362695 102 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 RNU6-259P-201ENST00000383999 107 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 RNU6-339P-201ENST00000384310 107 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 Y_RNA.493-201ENST00000384422 102 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 Y_RNA.582-201ENST00000391023 95 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 RPL7P25-201ENST00000404151 721 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 AL583834.1-201ENST00000406943 343 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 AC078974.1-201ENST00000411597 223 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 RPS3AP3-201ENST00000411933 242 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 Z99755.1-201ENST00000414048 380 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 HMGB3P23-201ENST00000414981 585 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 MTND6P13-201ENST00000443510 523 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 NANOGNBP1-201ENST00000448444 480 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 AC093899.1-201ENST00000457984 376 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 snoU13.24-201ENST00000458998 104 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 SRRM1P2-201ENST00000464531 1192 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 AC023424.2-201ENST00000493479 777 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 AC112204.1-201ENST00000502591 103 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 AC138853.1-201ENST00000503549 823 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 HSPD1P15-201ENST00000505573 1122 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 AP003467.2-201ENST00000520175 319 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 AC245505.1-201ENST00000556398 224 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 MIR3913-1-201ENST00000577744 102 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 AC108479.2-201ENST00000617314 601 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 AC091925.2-201ENST00000625059 256 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 MIR7153-201ENST00000637758 57 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 AL513302.2-201ENST00000562313 1842 ntBASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.64□□□□□ -1.83
SNX9Q9Y5X1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 MTND5P33-201ENST00000571250 1450 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 AL161781.1-201ENST00000354277 403 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 RNY4P24-201ENST00000362735 96 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 RNU6-989P-201ENST00000362756 107 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 Y_RNA.234-201ENST00000364409 97 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 RNU6-629P-201ENST00000384061 103 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 AL158071.1-201ENST00000430315 461 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 AC009961.2-201ENST00000435771 251 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 GAPDHP17-201ENST00000449858 1001 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 KLF3P2-201ENST00000465138 268 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 AP001025.2-201ENST00000490908 477 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 AF213884.2-201ENST00000510417 903 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 ARL2BPP6-201ENST00000512757 439 ntBASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.63□□□□□ -1.83
SNX9Q9Y5X1 RN7SKP298-201ENST00000515950 94 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms