Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 RNA5SP52-201ENST00000362448 134 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 RNU6-552P-201ENST00000362869 119 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 Y_RNA.576-201ENST00000384781 102 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 MT-TL1-201ENST00000386347 75 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 RNA5SP129-201ENST00000410276 118 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 RNU6-1068P-201ENST00000410958 103 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 AC080125.1-201ENST00000414888 684 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 EIF4EP1-201ENST00000422311 642 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 MTCYBP8-201ENST00000422855 651 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 AF228730.2-201ENST00000438784 848 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 HSFY6P-201ENST00000445573 403 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 RPL21P8-201ENST00000465083 535 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 RNU6-685P-201ENST00000517088 95 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 RNA5SP291-201ENST00000517222 105 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 AP001804.3-201ENST00000525146 880 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 AL352979.3-201ENST00000553515 247 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 AC106785.1-201ENST00000565935 262 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 AC005951.2-201ENST00000576282 495 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 AL138889.2-201ENST00000603883 242 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 BNIP3P10-201ENST00000605360 577 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 AC107294.1-201ENST00000609524 467 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 AL713922.2-201ENST00000619384 716 ntBASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGA9Q9Y5G4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PCDHGA9Q9Y5G4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PCDHGA9Q9Y5G4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
PCDHGA9Q9Y5G4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.15□□□□□ -1.74
PCDHGA9Q9Y5G4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PCDHGA9Q9Y5G4 TPTE2P4-201ENST00000258589 1605 ntBASIC4.15□□□□□ -1.74
PCDHGA9Q9Y5G4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 MARK2P15-201ENST00000432204 2186 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 MIR448-201ENST00000362131 111 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 RNU6-867P-201ENST00000364956 107 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 AL022722.2-201ENST00000402519 180 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 AL606923.1-201ENST00000406616 190 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 AC009237.5-201ENST00000414271 501 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 CRYBB2P1-203ENST00000415709 538 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 RPL7P46-201ENST00000425129 740 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 AL513185.2-201ENST00000425543 193 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 AC093106.2-201ENST00000428212 385 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 MTND4P25-201ENST00000441039 533 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 PRDX3P3-201ENST00000447765 522 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 RPS20P22-201ENST00000473700 357 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 AC139783.2-201ENST00000504847 1145 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 AC098591.2-201ENST00000510152 315 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 AP005435.4-201ENST00000529514 284 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 AL138976.2-201ENST00000563989 694 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 uc_338.13-201ENST00000618243 179 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 AC233309.1-201ENST00000619522 751 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 RNA5SP196-201ENST00000625967 102 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHGA9Q9Y5G4 OR4G2P-202ENST00000641004 1759 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 OR4G1P-203ENST00000641984 1631 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 Y_RNA.72-201ENST00000362894 103 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 Y_RNA.390-201ENST00000383932 102 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 MIR134-201ENST00000385258 73 ntBASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHGA9Q9Y5G4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms