Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 Y_RNA.60-201ENST00000362831 98 ntBASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 Y_RNA.117-201ENST00000363294 101 ntBASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 Y_RNA.333-201ENST00000365274 102 ntBASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 OR1L6-202ENST00000373684 1044 ntBASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 RPL21P90-201ENST00000415692 466 ntBASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 AC139712.2-201ENST00000424302 339 ntBASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 RPS20P1-201ENST00000434853 354 ntBASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 DAP3P1-201ENST00000441522 278 ntBASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 RPS3AP12-201ENST00000443616 753 ntBASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 AL590664.1-201ENST00000448065 339 ntBASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 IGHV5-78-201ENST00000450948 295 ntBASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 RPL39P38-201ENST00000467018 153 ntBASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 MIR2116-201ENST00000517221 80 ntBASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 AC023575.1-201ENST00000580510 358 ntBASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 MIR4715-201ENST00000584117 79 ntBASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 AC011626.1-201ENST00000604710 562 ntBASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HCN4Q9Y3Q4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 RNU6-1155P-201ENST00000363554 107 ntBASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 RNU6-770P-201ENST00000363929 105 ntBASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 Y_RNA.478-201ENST00000384358 107 ntBASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 RNU6-1093P-201ENST00000391194 107 ntBASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 RNU2-38P-201ENST00000410856 79 ntBASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 AL030996.1-201ENST00000411430 235 ntBASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 EI24P4-201ENST00000423683 1078 ntBASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 AC112498.1-201ENST00000444401 332 ntBASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 AC018437.1-201ENST00000492214 406 ntBASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 RPS27AP13-201ENST00000498403 237 ntBASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 COX6B1P5-201ENST00000509843 249 ntBASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 AC025465.3-201ENST00000510570 311 ntBASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 MIR4311-201ENST00000580794 100 ntBASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 MIR3944-201ENST00000581277 108 ntBASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 VN1R91P-201ENST00000594377 169 ntBASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 AL356218.2-201ENST00000605264 187 ntBASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 AL160281.1-201ENST00000605307 311 ntBASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 MIR15A-201ENST00000607334 83 ntBASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 AC023043.4-201ENST00000612081 449 ntBASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 AL031601.2-202ENST00000622650 282 ntBASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 SCARNA15-201ENST00000607520 4325 ntBASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
HCN4Q9Y3Q4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HCN4Q9Y3Q4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HCN4Q9Y3Q4 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.41□□□□□ -1.54
HCN4Q9Y3Q4 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.41□□□□□ -1.54
HCN4Q9Y3Q4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HCN4Q9Y3Q4 RNU6-288P-201ENST00000363690 104 ntBASIC5.41□□□□□ -1.54
HCN4Q9Y3Q4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
HCN4Q9Y3Q4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HCN4Q9Y3Q4 MIR600-201ENST00000385007 98 ntBASIC5.41□□□□□ -1.54
HCN4Q9Y3Q4 RPL21P67-201ENST00000402896 478 ntBASIC5.41□□□□□ -1.54
HCN4Q9Y3Q4 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.41□□□□□ -1.54
HCN4Q9Y3Q4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.41□□□□□ -1.54
HCN4Q9Y3Q4 BX842559.1-201ENST00000419615 532 ntBASIC5.41□□□□□ -1.54
HCN4Q9Y3Q4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms