Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 RNU6-420P-201ENST00000458780 107 ntBASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 AC008379.1-201ENST00000463655 464 ntBASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 RPL31P41-201ENST00000477967 372 ntBASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 AL049873.1-201ENST00000480540 376 ntBASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 BOLA3P3-201ENST00000505182 232 ntBASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 RNA5SP320-201ENST00000516263 124 ntBASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 RNA5SP471-201ENST00000516971 106 ntBASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 RPL7P20-201ENST00000520308 745 ntBASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 AC106782.4-201ENST00000568264 210 ntBASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 OR1M4P-201ENST00000589199 287 ntBASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 AC013553.2-201ENST00000604244 589 ntBASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 AC007621.1-201ENST00000604544 437 ntBASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 AC026790.2-201ENST00000606282 430 ntBASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 AL354696.1-201ENST00000614652 497 ntBASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 UCA1.1-201ENST00000620952 75 ntBASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 AC011330.2-201ENST00000621680 635 ntBASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 AP000553.5-201ENST00000641933 54 ntBASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 OR5H6-203ENST00000642105 978 ntBASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 MTCO1P4-201ENST00000520516 1409 ntBASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HHLA3Q9XRX5 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.71□□□□□ -2.13
HHLA3Q9XRX5 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.71□□□□□ -2.13
HHLA3Q9XRX5 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 RNU6-1066P-201ENST00000363573 105 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 AL122016.1-201ENST00000403365 367 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 PTGES3P2-201ENST00000407942 482 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 RNU6-193P-201ENST00000410977 107 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 AC009237.8-201ENST00000445492 379 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 SEPT14P24-201ENST00000447236 180 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 AC005297.2-201ENST00000450430 606 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 AC078857.1-201ENST00000469870 667 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 RPS15AP34-201ENST00000487776 387 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 GTF2IP9-201ENST00000502460 301 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 GZMAP1-201ENST00000503054 631 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 AC008427.1-201ENST00000503102 655 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 KLRA1P-201ENST00000503499 986 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 SNORA31.22-201ENST00000517204 135 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 AC023632.1-201ENST00000518463 375 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 AC027309.2-201ENST00000520566 192 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 AP000889.2-201ENST00000532684 490 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 GLYCAM1-201ENST00000546596 285 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 AC093510.2-201ENST00000562820 896 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 AC009127.3-201ENST00000570531 403 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 AC090330.1-201ENST00000588646 764 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 BNIP3P24-201ENST00000593398 557 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 AC098483.2-201ENST00000603158 454 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 TUG1_1.1-201ENST00000610654 145 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 AC245884.12-201ENST00000615364 59 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 AC025588.4-201ENST00000615802 908 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 SCARNA15.3-201ENST00000626315 122 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 SCARNA4.1-201ENST00000628597 123 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 CU459211.1-201ENST00000635667 749 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 CR848007.1-201ENST00000442354 1699 ntBASIC1.71□□□□□ -2.14
HHLA3Q9XRX5 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.7□□□□□ -2.14
HHLA3Q9XRX5 AL136360.1-201ENST00000503377 1900 ntBASIC1.7□□□□□ -2.14
HHLA3Q9XRX5 RNA5SP37-201ENST00000365420 130 ntBASIC1.7□□□□□ -2.14
HHLA3Q9XRX5 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HHLA3Q9XRX5 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HHLA3Q9XRX5 RNU6-354P-201ENST00000383862 107 ntBASIC1.7□□□□□ -2.14
HHLA3Q9XRX5 RNU1-52P-201ENST00000384190 164 ntBASIC1.7□□□□□ -2.14
HHLA3Q9XRX5 RNU6-610P-201ENST00000384264 107 ntBASIC1.7□□□□□ -2.14
HHLA3Q9XRX5 RNU6-301P-201ENST00000384277 107 ntBASIC1.7□□□□□ -2.14
HHLA3Q9XRX5 RNU6-1035P-201ENST00000384477 107 ntBASIC1.7□□□□□ -2.14
HHLA3Q9XRX5 U3.20-201ENST00000390909 217 ntBASIC1.7□□□□□ -2.14
HHLA3Q9XRX5 RNA5SP354-201ENST00000391247 136 ntBASIC1.7□□□□□ -2.14
HHLA3Q9XRX5 MCTS2P-201ENST00000394552 546 ntBASIC1.7□□□□□ -2.14
HHLA3Q9XRX5 AL356131.1-201ENST00000405826 414 ntBASIC1.7□□□□□ -2.14
HHLA3Q9XRX5 AL513475.1-201ENST00000406602 315 ntBASIC1.7□□□□□ -2.14
HHLA3Q9XRX5 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms