Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 BTBD10P1-201ENST00000549824 1352 ntBASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 AC007529.1-201ENST00000418574 2178 ntBASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 Y_RNA.116-201ENST00000363292 103 ntBASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 Y_RNA.525-201ENST00000384570 113 ntBASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 RPS4XP3-201ENST00000398541 413 ntBASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 RNU6ATAC18P-201ENST00000408413 101 ntBASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 AL096701.2-201ENST00000416920 238 ntBASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 AC063976.4-201ENST00000421971 163 ntBASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 TOMM22P6-201ENST00000465035 409 ntBASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 RNU6-941P-201ENST00000516346 108 ntBASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 Y_RNA.712-201ENST00000517011 92 ntBASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 IGKV2-19-201ENST00000518132 283 ntBASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 SNRPGP16-201ENST00000533275 226 ntBASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 AC090049.2-201ENST00000550377 109 ntBASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 AP000787.2-201ENST00000604432 568 ntBASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 snoU18.1-201ENST00000629629 71 ntBASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 MIR3658-201ENST00000636291 56 ntBASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM35Q9UPQ4 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
TRIM35Q9UPQ4 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
TRIM35Q9UPQ4 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 AL365440.1-201ENST00000436135 2167 ntBASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 Y_RNA.172-201ENST00000363765 102 ntBASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 RNU6-318P-201ENST00000384283 103 ntBASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 RNY4P30-201ENST00000410216 95 ntBASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 USP9YP7-201ENST00000436723 430 ntBASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 AC016700.2-201ENST00000446011 156 ntBASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 USP9YP32-201ENST00000452432 430 ntBASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 AC107027.2-201ENST00000512197 115 ntBASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 AP003327.1-201ENST00000529684 127 ntBASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 AC007225.2-201ENST00000562529 256 ntBASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 AC008758.3-201ENST00000507003 1829 ntBASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 SNX18P3-202ENST00000565670 1750 ntBASIC7.08□□□□□ -1.28
TRIM35Q9UPQ4 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 RNU6-222P-201ENST00000362438 107 ntBASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 SNORA12.1-201ENST00000390873 148 ntBASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 CTSL3P-202ENST00000412179 788 ntBASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 TBCAP2-201ENST00000416175 326 ntBASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 HIGD1AP2-201ENST00000446367 280 ntBASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 GLUD1P3-202ENST00000508551 200 ntBASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 BX510359.5-201ENST00000515651 304 ntBASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 SNORA40.9-201ENST00000515895 93 ntBASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 NDUFA5P6-201ENST00000542110 379 ntBASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 RPL10P14-201ENST00000565265 298 ntBASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 AC100778.3-201ENST00000580060 1750 ntBASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 AC139769.1-204ENST00000472297 1931 ntBASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 AC004158.1-201ENST00000564508 4319 ntBASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM35Q9UPQ4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM35Q9UPQ4 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC7.06□□□□□ -1.28
TRIM35Q9UPQ4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM35Q9UPQ4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM35Q9UPQ4 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
TRIM35Q9UPQ4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
TRIM35Q9UPQ4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
TRIM35Q9UPQ4 SNORA26.2-201ENST00000390922 122 ntBASIC7.06□□□□□ -1.28
TRIM35Q9UPQ4 U3.29-201ENST00000391296 212 ntBASIC7.06□□□□□ -1.28
TRIM35Q9UPQ4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC7.06□□□□□ -1.28
TRIM35Q9UPQ4 AC138761.5-201ENST00000433967 325 ntBASIC7.06□□□□□ -1.28
TRIM35Q9UPQ4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC7.06□□□□□ -1.28
TRIM35Q9UPQ4 RPL12P18-201ENST00000437175 325 ntBASIC7.06□□□□□ -1.28
TRIM35Q9UPQ4 AC073587.1-201ENST00000447093 876 ntBASIC7.06□□□□□ -1.28
TRIM35Q9UPQ4 RPL31P61-201ENST00000496160 376 ntBASIC7.06□□□□□ -1.28
TRIM35Q9UPQ4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC7.06□□□□□ -1.28
TRIM35Q9UPQ4 Y_RNA.797-201ENST00000515977 94 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms