Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN11AQ9UI33 MIR6840-201ENST00000611937 71 ntBASIC1.85□□□□□ -2.11
SCN11AQ9UI33 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC1.85□□□□□ -2.11
SCN11AQ9UI33 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN11AQ9UI33 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.85□□□□□ -2.11
SCN11AQ9UI33 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.85□□□□□ -2.11
SCN11AQ9UI33 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SCN11AQ9UI33 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
SCN11AQ9UI33 SNORA67.6-201ENST00000391093 99 ntBASIC1.85□□□□□ -2.11
SCN11AQ9UI33 U3.40-201ENST00000408706 208 ntBASIC1.85□□□□□ -2.11
SCN11AQ9UI33 AL513185.2-201ENST00000425543 193 ntBASIC1.85□□□□□ -2.11
SCN11AQ9UI33 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN11AQ9UI33 MTCO3P44-201ENST00000510977 541 ntBASIC1.85□□□□□ -2.11
SCN11AQ9UI33 OR10AB1P-201ENST00000609613 938 ntBASIC1.85□□□□□ -2.11
SCN11AQ9UI33 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.85□□□□□ -2.11
SCN11AQ9UI33 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.11
SCN11AQ9UI33 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SCN11AQ9UI33 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SCN11AQ9UI33 AC090740.1-201ENST00000623193 2262 ntBASIC1.84□□□□□ -2.11
SCN11AQ9UI33 RNU1-93P-201ENST00000364704 169 ntBASIC1.84□□□□□ -2.12
SCN11AQ9UI33 SNORA6-201ENST00000384033 151 ntBASIC1.84□□□□□ -2.12
SCN11AQ9UI33 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.84□□□□□ -2.12
SCN11AQ9UI33 IFNA20P-201ENST00000436840 528 ntBASIC1.84□□□□□ -2.12
SCN11AQ9UI33 OR10R1P-201ENST00000441524 1141 ntBASIC1.84□□□□□ -2.12
SCN11AQ9UI33 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.84□□□□□ -2.12
SCN11AQ9UI33 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.84□□□□□ -2.12
SCN11AQ9UI33 MTCO2P9-201ENST00000503214 694 ntBASIC1.84□□□□□ -2.12
SCN11AQ9UI33 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.84□□□□□ -2.12
SCN11AQ9UI33 AP001804.3-201ENST00000525146 880 ntBASIC1.84□□□□□ -2.12
SCN11AQ9UI33 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.84□□□□□ -2.12
SCN11AQ9UI33 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.84□□□□□ -2.12
SCN11AQ9UI33 AL161912.3-201ENST00000605404 628 ntBASIC1.84□□□□□ -2.12
SCN11AQ9UI33 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.84□□□□□ -2.12
SCN11AQ9UI33 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.84□□□□□ -2.12
SCN11AQ9UI33 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.84□□□□□ -2.12
SCN11AQ9UI33 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
SCN11AQ9UI33 MIR627-201ENST00000384979 97 ntBASIC1.83□□□□□ -2.12
SCN11AQ9UI33 AC093084.1-201ENST00000424233 687 ntBASIC1.83□□□□□ -2.12
SCN11AQ9UI33 AL365400.1-201ENST00000431854 640 ntBASIC1.83□□□□□ -2.12
SCN11AQ9UI33 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.83□□□□□ -2.12
SCN11AQ9UI33 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.83□□□□□ -2.12
SCN11AQ9UI33 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC1.83□□□□□ -2.12
SCN11AQ9UI33 AL137100.2-201ENST00000555786 315 ntBASIC1.83□□□□□ -2.12
SCN11AQ9UI33 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.83□□□□□ -2.12
SCN11AQ9UI33 SNRPGP15-201ENST00000600149 222 ntBASIC1.83□□□□□ -2.12
SCN11AQ9UI33 AC126118.1-201ENST00000607744 628 ntBASIC1.83□□□□□ -2.12
SCN11AQ9UI33 STMN1P1-201ENST00000617809 440 ntBASIC1.83□□□□□ -2.12
SCN11AQ9UI33 AC022079.2-201ENST00000619739 566 ntBASIC1.83□□□□□ -2.12
SCN11AQ9UI33 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SCN11AQ9UI33 AC090774.1-201ENST00000435925 246 ntBASIC1.82□□□□□ -2.12
SCN11AQ9UI33 MED6P1-201ENST00000439659 713 ntBASIC1.82□□□□□ -2.12
SCN11AQ9UI33 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN11AQ9UI33 RN7SL274P-201ENST00000492268 272 ntBASIC1.82□□□□□ -2.12
SCN11AQ9UI33 MTCYBP18-201ENST00000501056 747 ntBASIC1.82□□□□□ -2.12
SCN11AQ9UI33 Y_RNA.675-201ENST00000516389 149 ntBASIC1.82□□□□□ -2.12
SCN11AQ9UI33 AP002748.2-201ENST00000528671 348 ntBASIC1.82□□□□□ -2.12
SCN11AQ9UI33 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.82□□□□□ -2.12
SCN11AQ9UI33 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN11AQ9UI33 AC136443.5-201ENST00000603741 370 ntBASIC1.82□□□□□ -2.12
SCN11AQ9UI33 AC080078.3-201ENST00000605407 463 ntBASIC1.82□□□□□ -2.12
SCN11AQ9UI33 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.82□□□□□ -2.12
SCN11AQ9UI33 AC006329.2-201ENST00000611491 394 ntBASIC1.82□□□□□ -2.12
SCN11AQ9UI33 AL390240.1-201ENST00000612950 384 ntBASIC1.82□□□□□ -2.12
SCN11AQ9UI33 AC245884.12-201ENST00000615364 59 ntBASIC1.82□□□□□ -2.12
SCN11AQ9UI33 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.82□□□□□ -2.12
SCN11AQ9UI33 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.82□□□□□ -2.12
SCN11AQ9UI33 PGBD4P3-201ENST00000440731 581 ntBASIC1.82□□□□□ -2.12
SCN11AQ9UI33 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN11AQ9UI33 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN11AQ9UI33 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN11AQ9UI33 AC022493.1-201ENST00000492984 337 ntBASIC1.82□□□□□ -2.12
SCN11AQ9UI33 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.82□□□□□ -2.12
SCN11AQ9UI33 RNU6-1223P-201ENST00000517124 104 ntBASIC1.82□□□□□ -2.12
SCN11AQ9UI33 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN11AQ9UI33 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN11AQ9UI33 AC095038.3-201ENST00000634439 195 ntBASIC1.82□□□□□ -2.12
SCN11AQ9UI33 AC116618.1-201ENST00000634617 774 ntBASIC1.82□□□□□ -2.12
SCN11AQ9UI33 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SCN11AQ9UI33 DEFB109C-201ENST00000382575 264 ntBASIC1.81□□□□□ -2.12
SCN11AQ9UI33 DEFB109B-201ENST00000382656 264 ntBASIC1.81□□□□□ -2.12
SCN11AQ9UI33 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.81□□□□□ -2.12
SCN11AQ9UI33 TRGV6-201ENST00000417928 299 ntBASIC1.81□□□□□ -2.12
SCN11AQ9UI33 MTATP6P4-201ENST00000427725 675 ntBASIC1.81□□□□□ -2.12
SCN11AQ9UI33 NF1P3-201ENST00000457709 450 ntBASIC1.81□□□□□ -2.12
SCN11AQ9UI33 AC096571.1-202ENST00000506634 735 ntBASIC1.81□□□□□ -2.12
SCN11AQ9UI33 LTV1P1-201ENST00000510683 1237 ntBASIC1.81□□□□□ -2.12
SCN11AQ9UI33 RN7SKP5-201ENST00000517045 272 ntBASIC1.81□□□□□ -2.12
SCN11AQ9UI33 AC025755.1-201ENST00000521306 278 ntBASIC1.81□□□□□ -2.12
SCN11AQ9UI33 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.81□□□□□ -2.12
SCN11AQ9UI33 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.81□□□□□ -2.12
SCN11AQ9UI33 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.81□□□□□ -2.12
SCN11AQ9UI33 MIR7973-1-201ENST00000614683 76 ntBASIC1.81□□□□□ -2.12
SCN11AQ9UI33 MIR203B-201ENST00000636080 86 ntBASIC1.81□□□□□ -2.12
SCN11AQ9UI33 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SCN11AQ9UI33 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.81□□□□□ -2.12
SCN11AQ9UI33 AC073055.1-201ENST00000456901 1621 ntBASIC1.8□□□□□ -2.12
SCN11AQ9UI33 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.8□□□□□ -2.12
SCN11AQ9UI33 AL445183.3-201ENST00000414168 502 ntBASIC1.8□□□□□ -2.12
SCN11AQ9UI33 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.8□□□□□ -2.12
SCN11AQ9UI33 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms