Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.27□□□□□ -1.57
CNTN3Q9P232 U2.1-201ENST00000618978 145 ntBASIC5.27□□□□□ -1.57
CNTN3Q9P232 AL022401.1-201ENST00000619498 108 ntBASIC5.27□□□□□ -1.57
CNTN3Q9P232 BX005214.3-202ENST00000619809 325 ntBASIC5.27□□□□□ -1.57
CNTN3Q9P232 AL606534.2-204ENST00000635008 178 ntBASIC5.27□□□□□ -1.57
CNTN3Q9P232 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CNTN3Q9P232 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CNTN3Q9P232 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.27□□□□□ -1.57
CNTN3Q9P232 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CNTN3Q9P232 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CNTN3Q9P232 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CNTN3Q9P232 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CNTN3Q9P232 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.27□□□□□ -1.57
CNTN3Q9P232 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.27□□□□□ -1.57
CNTN3Q9P232 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CNTN3Q9P232 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.27□□□□□ -1.57
CNTN3Q9P232 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.26□□□□□ -1.57
CNTN3Q9P232 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNTN3Q9P232 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CNTN3Q9P232 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNTN3Q9P232 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNTN3Q9P232 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.26□□□□□ -1.57
CNTN3Q9P232 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CNTN3Q9P232 AC063976.2-201ENST00000425667 3556 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 Y_RNA.257-201ENST00000364596 102 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 RNU6-45P-201ENST00000384471 107 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 RNU6-823P-201ENST00000391042 103 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 RNU6-817P-201ENST00000391083 104 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 U3.30-201ENST00000391308 210 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 AL590704.1-201ENST00000402856 794 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 AC007738.1-201ENST00000413892 348 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.26□□□□□ -1.57
CNTN3Q9P232 AC004866.2-201ENST00000438285 481 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 AC090686.1-201ENST00000481577 749 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 AC007686.1-201ENST00000488511 463 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 RPL22P13-201ENST00000493291 347 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 SCARNA22-201ENST00000503991 125 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 RNY3P15-201ENST00000516297 97 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 Y_RNA.719-201ENST00000517156 106 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 AP000827.1-201ENST00000527814 258 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 AP001880.2-201ENST00000538233 448 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 SUB1P3-201ENST00000564581 315 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 MIR4270-201ENST00000581799 70 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 MIR3936-201ENST00000584304 110 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CNTN3Q9P232 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.26□□□□□ -1.57
CNTN3Q9P232 AC107871.2-201ENST00000612894 502 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 HMGB1P24-202ENST00000615653 685 ntBASIC5.26□□□□□ -1.57
CNTN3Q9P232 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.26□□□□□ -1.57
CNTN3Q9P232 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CNTN3Q9P232 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.26□□□□□ -1.57
CNTN3Q9P232 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.26□□□□□ -1.57
CNTN3Q9P232 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CNTN3Q9P232 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.25□□□□□ -1.57
CNTN3Q9P232 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
CNTN3Q9P232 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNTN3Q9P232 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNTN3Q9P232 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
CNTN3Q9P232 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.25□□□□□ -1.57
CNTN3Q9P232 AC091812.1-201ENST00000432235 1948 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNTN3Q9P232 RHOT1P2-201ENST00000366423 333 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CNTN3Q9P232 RNU6-306P-201ENST00000384617 107 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 AL080315.1-201ENST00000406055 466 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.25□□□□□ -1.57
CNTN3Q9P232 AL590139.1-201ENST00000416267 400 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 BX510359.2-201ENST00000417920 305 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 AC243428.1-201ENST00000421099 264 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 AL160275.3-201ENST00000423876 471 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 OR2AH1P-201ENST00000425717 928 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 AC011816.1-201ENST00000441346 546 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 RPS5P7-201ENST00000456664 608 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 RNU7-138P-201ENST00000459479 64 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 AC104564.1-201ENST00000493028 407 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 AC009901.1-201ENST00000506703 541 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 RNU6-1095P-201ENST00000516148 108 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 RNU4-77P-201ENST00000516692 156 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 AC069113.1-201ENST00000517763 267 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 RPL23AP53-201ENST00000521854 457 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.25□□□□□ -1.57
CNTN3Q9P232 AC007991.1-201ENST00000522680 631 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 AL049839.1-201ENST00000556151 657 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNTN3Q9P232 AC005357.1-201ENST00000588399 301 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.25□□□□□ -1.57
CNTN3Q9P232 AC012119.1-201ENST00000603184 222 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNTN3Q9P232 AL021879.1-201ENST00000611756 288 ntBASIC5.25□□□□□ -1.57
CNTN3Q9P232 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNTN3Q9P232 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNTN3Q9P232 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
CNTN3Q9P232 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNTN3Q9P232 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNTN3Q9P232 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNTN3Q9P232 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CNTN3Q9P232 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNTN3Q9P232 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
CNTN3Q9P232 MFSD8-216ENST00000641147 4009 ntBASIC5.24□□□□□ -1.57
CNTN3Q9P232 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms