Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 RNU6-1256P-201ENST00000516539 103 ntBASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 AC005832.3-201ENST00000537929 631 ntBASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 AC124947.2-202ENST00000552735 133 ntBASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 AL132857.1-201ENST00000555180 708 ntBASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 AL158163.2-201ENST00000619110 700 ntBASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 AL445264.1-201ENST00000621719 171 ntBASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 AC084035.1-201ENST00000634543 607 ntBASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 AL049641.1-201ENST00000441055 1948 ntBASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 AL079343.1-201ENST00000572358 1771 ntBASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 OR4G2P-202ENST00000641004 1759 ntBASIC2.63□□□□□ -1.99
KLHL28Q9NXS3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 RNU6-343P-201ENST00000364709 104 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 AL390023.1-201ENST00000428836 262 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 RPS29P6-201ENST00000438196 145 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 AL513043.1-201ENST00000439124 535 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 RPS15AP27-201ENST00000449183 343 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 NIPA2P5-201ENST00000452282 464 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 SNORD121B-201ENST00000458838 81 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 snoU13.8-201ENST00000458890 104 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 AC117522.3-201ENST00000507974 584 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 AP000857.1-201ENST00000532151 543 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 AL132657.2-201ENST00000564417 358 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 AC068135.2-201ENST00000569293 1028 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 MIR4513-201ENST00000581077 86 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 AC090616.3-201ENST00000582184 217 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 MIR5194-201ENST00000582634 120 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 ZNF861P-201ENST00000588126 639 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 OR1M4P-201ENST00000589199 287 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 VN1R83P-201ENST00000595685 445 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 AC107871.2-201ENST00000612894 502 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 AL138955.1-201ENST00000622881 1040 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 AC005858.4-201ENST00000623191 700 ntBASIC2.62□□□□□ -1.99
KLHL28Q9NXS3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 RNU6-952P-201ENST00000391164 108 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 AL590084.1-201ENST00000407885 387 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 AL139132.1-201ENST00000431587 344 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 OR4K11P-201ENST00000431829 904 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 BMI1P1-201ENST00000445879 941 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 AC092155.2-201ENST00000454675 477 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 RNU7-23P-201ENST00000459465 62 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 AC087588.1-201ENST00000462203 316 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 AC097493.1-201ENST00000463958 372 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 RPL31P50-201ENST00000471002 296 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 CDC42P4-201ENST00000510507 563 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 AC091826.1-201ENST00000514065 313 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 GTF3AP2-201ENST00000557014 266 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 AC005498.1-201ENST00000592125 465 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 AC023043.3-201ENST00000593113 385 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 AL606834.3-201ENST00000602615 496 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 AC069234.5-201ENST00000611056 416 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 AC104763.3-201ENST00000613765 618 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 SNHG22-203ENST00000617833 660 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 AL355493.4-201ENST00000618530 292 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 MIR4275-201ENST00000636486 87 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 AC007785.2-201ENST00000598627 1916 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 AC092593.1-201ENST00000515413 1815 ntBASIC2.61□□□□□ -1.99
KLHL28Q9NXS3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 AC135776.4-201ENST00000624300 1904 ntBASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 OR5J1P-201ENST00000313544 939 ntBASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 RNU5E-8P-201ENST00000363502 116 ntBASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 UBE2V1P2-201ENST00000397758 440 ntBASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 AL358075.3-201ENST00000426289 226 ntBASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.6□□□□□ -1.99
KLHL28Q9NXS3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms