Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 U8.14-201ENST00000390843 143 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 RNU6-278P-201ENST00000390945 109 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 CCNG1P1-201ENST00000406783 885 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 RNU2-33P-201ENST00000410344 192 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 RPL21P24-201ENST00000413752 448 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 AL096701.2-201ENST00000416920 238 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 AL389915.1-201ENST00000422463 466 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 PIGFP3-201ENST00000441918 722 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 OR6C5P-201ENST00000452388 923 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 RN7SL594P-201ENST00000470590 287 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 AC055855.1-201ENST00000489563 579 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 OR2A20P-203ENST00000498397 1268 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 RNU6-201P-201ENST00000517100 61 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 AP002748.2-201ENST00000528671 348 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 AP000867.2-201ENST00000532468 320 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 CYCSP30-201ENST00000546447 172 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 AC093012.1-202ENST00000549403 582 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 AC034105.3-201ENST00000565294 442 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 MIR3160-1-201ENST00000577972 85 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 AC002545.1-201ENST00000592511 181 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 AC020895.1-201ENST00000595362 272 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 AC012119.1-201ENST00000603184 222 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 AC107214.2-201ENST00000608204 634 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 AC017037.3-201ENST00000625016 472 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AL121657.1-201ENST00000327215 531 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 RNU6-1284P-201ENST00000363701 100 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AL139095.1-201ENST00000404326 391 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 RN7SKP140-201ENST00000411196 284 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AC107081.1-201ENST00000414975 361 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AL139247.1-201ENST00000422768 325 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AC092047.1-201ENST00000424997 240 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 OR2AS1P-201ENST00000427827 319 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 RPL21P133-201ENST00000443666 476 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 CENPBD1P1-201ENST00000464061 469 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AC103987.1-201ENST00000473394 348 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 RN7SL323P-201ENST00000494712 295 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 APOOP4-201ENST00000513530 597 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 DEFB108A-201ENST00000530110 222 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AC128657.1-201ENST00000549459 145 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 ZNF321P-202ENST00000550843 495 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AL591034.3-201ENST00000605511 685 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 OR10AB1P-201ENST00000609613 938 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AC087683.2-201ENST00000611384 326 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AC090970.3-201ENST00000612566 866 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AC005344.1-201ENST00000613391 459 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AC004852.3-201ENST00000614131 326 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AC012150.2-201ENST00000621300 544 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AL357559.1-201ENST00000622228 274 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AP002791.1-201ENST00000623291 381 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AL356863.1-201ENST00000623378 1080 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AC112204.3-201ENST00000623822 332 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AC007671.2-201ENST00000637344 619 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 CR383658.2-201ENST00000547576 1525 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AC009487.2-201ENST00000420969 6821 ntBASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CHCHD3Q9NX63 AP004289.2-201ENST00000444413 1457 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 RNU6-660P-201ENST00000364566 109 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 RNU6-1180P-201ENST00000364935 107 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AC007066.1-201ENST00000392902 381 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 RNU2-25P-201ENST00000411041 191 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AL356095.1-201ENST00000417217 199 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 Z99497.1-201ENST00000421282 135 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AL593851.1-201ENST00000426171 157 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AL591419.1-201ENST00000427423 339 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AC005094.1-201ENST00000440420 368 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 AL049734.2-201ENST00000441066 616 ntBASIC3.16□□□□□ -1.9
CHCHD3Q9NX63 BNIP3P2-201ENST00000441221 577 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms