Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.11□□□□□ -1.91
RBM28Q9NW13 TRGVB-201ENST00000453257 471 ntBASIC3.11□□□□□ -1.91
RBM28Q9NW13 AL109741.2-201ENST00000455561 343 ntBASIC3.11□□□□□ -1.91
RBM28Q9NW13 RPL9P33-201ENST00000484311 566 ntBASIC3.11□□□□□ -1.91
RBM28Q9NW13 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RBM28Q9NW13 AC090453.1-201ENST00000495560 436 ntBASIC3.11□□□□□ -1.91
RBM28Q9NW13 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.11□□□□□ -1.91
RBM28Q9NW13 AC114322.1-201ENST00000506771 926 ntBASIC3.11□□□□□ -1.91
RBM28Q9NW13 HMGB1P28-201ENST00000507778 552 ntBASIC3.11□□□□□ -1.91
RBM28Q9NW13 CDC42P4-201ENST00000510507 563 ntBASIC3.11□□□□□ -1.91
RBM28Q9NW13 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.11□□□□□ -1.91
RBM28Q9NW13 AC034159.1-201ENST00000513885 583 ntBASIC3.11□□□□□ -1.91
RBM28Q9NW13 OR4R1P-201ENST00000529879 463 ntBASIC3.11□□□□□ -1.91
RBM28Q9NW13 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.11□□□□□ -1.91
RBM28Q9NW13 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RBM28Q9NW13 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.11□□□□□ -1.91
RBM28Q9NW13 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.11□□□□□ -1.91
RBM28Q9NW13 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.11□□□□□ -1.91
RBM28Q9NW13 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.11□□□□□ -1.91
RBM28Q9NW13 AL022099.1-201ENST00000604551 712 ntBASIC3.11□□□□□ -1.91
RBM28Q9NW13 AP002826.1-201ENST00000608835 315 ntBASIC3.11□□□□□ -1.91
RBM28Q9NW13 AC016597.2-201ENST00000613256 341 ntBASIC3.11□□□□□ -1.91
RBM28Q9NW13 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.11□□□□□ -1.91
RBM28Q9NW13 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.11□□□□□ -1.91
RBM28Q9NW13 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.11□□□□□ -1.91
RBM28Q9NW13 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
RBM28Q9NW13 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
RBM28Q9NW13 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.11□□□□□ -1.91
RBM28Q9NW13 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.1□□□□□ -1.91
RBM28Q9NW13 RNU6-560P-201ENST00000364007 108 ntBASIC3.1□□□□□ -1.91
RBM28Q9NW13 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RBM28Q9NW13 RNU6-413P-201ENST00000384115 107 ntBASIC3.1□□□□□ -1.91
RBM28Q9NW13 ERHP2-201ENST00000402323 299 ntBASIC3.1□□□□□ -1.91
RBM28Q9NW13 AL590084.1-201ENST00000407885 387 ntBASIC3.1□□□□□ -1.91
RBM28Q9NW13 MTND2P5-201ENST00000432656 1006 ntBASIC3.1□□□□□ -1.91
RBM28Q9NW13 MTND4P6-201ENST00000438297 472 ntBASIC3.1□□□□□ -1.91
RBM28Q9NW13 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.1□□□□□ -1.91
RBM28Q9NW13 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.1□□□□□ -1.91
RBM28Q9NW13 AC007327.1-201ENST00000447461 264 ntBASIC3.1□□□□□ -1.91
RBM28Q9NW13 ZNF886P-201ENST00000450781 723 ntBASIC3.1□□□□□ -1.91
RBM28Q9NW13 SNRPGP6-201ENST00000451124 220 ntBASIC3.1□□□□□ -1.91
RBM28Q9NW13 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.1□□□□□ -1.91
RBM28Q9NW13 Z82190.1-201ENST00000454534 490 ntBASIC3.1□□□□□ -1.91
RBM28Q9NW13 VN1R104P-201ENST00000505115 1009 ntBASIC3.1□□□□□ -1.91
RBM28Q9NW13 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.1□□□□□ -1.91
RBM28Q9NW13 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.1□□□□□ -1.91
RBM28Q9NW13 SNORA70.16-201ENST00000516390 95 ntBASIC3.1□□□□□ -1.91
RBM28Q9NW13 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RBM28Q9NW13 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.1□□□□□ -1.91
RBM28Q9NW13 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.1□□□□□ -1.91
RBM28Q9NW13 AC106782.4-201ENST00000568264 210 ntBASIC3.1□□□□□ -1.91
RBM28Q9NW13 MIR4635-201ENST00000583759 79 ntBASIC3.1□□□□□ -1.91
RBM28Q9NW13 MTCO2P2-201ENST00000591258 225 ntBASIC3.1□□□□□ -1.91
RBM28Q9NW13 AC106052.1-201ENST00000608029 497 ntBASIC3.1□□□□□ -1.91
RBM28Q9NW13 AC009974.1-201ENST00000608881 455 ntBASIC3.1□□□□□ -1.91
RBM28Q9NW13 AC107075.1-201ENST00000613695 314 ntBASIC3.1□□□□□ -1.91
RBM28Q9NW13 AC004009.2-201ENST00000623016 728 ntBASIC3.1□□□□□ -1.91
RBM28Q9NW13 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.1□□□□□ -1.91
RBM28Q9NW13 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
RBM28Q9NW13 AC135776.4-201ENST00000624300 1904 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.91
RBM28Q9NW13 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RBM28Q9NW13 RNU6-859P-201ENST00000362728 107 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 RNU6-1122P-201ENST00000384449 107 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RBM28Q9NW13 DHFRP6-201ENST00000401776 268 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 AL356057.3-201ENST00000402607 340 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 HMGB1P17-201ENST00000403495 628 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RBM28Q9NW13 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RBM28Q9NW13 AC019178.2-201ENST00000423595 505 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 MRPL50P4-201ENST00000446432 475 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 AC005297.2-201ENST00000450430 606 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.09□□□□□ -1.91
RBM28Q9NW13 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RBM28Q9NW13 SNORD109B-201ENST00000458961 67 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 SNORD109A-201ENST00000459128 67 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 RN7SL297P-201ENST00000483161 293 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 TMEM251P1-201ENST00000503717 318 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RBM28Q9NW13 COX7A2P2-201ENST00000505291 250 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 RNU1-103P-201ENST00000516502 125 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 RNU1-104P-201ENST00000517280 175 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RBM28Q9NW13 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.09□□□□□ -1.91
RBM28Q9NW13 AP000867.2-201ENST00000532468 320 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.09□□□□□ -1.91
RBM28Q9NW13 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RBM28Q9NW13 MIR4513-201ENST00000581077 86 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.09□□□□□ -1.91
RBM28Q9NW13 VN1R90P-201ENST00000595717 726 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 AC243773.3-201ENST00000613270 256 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
RBM28Q9NW13 AL078595.3-201ENST00000623815 1166 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.09□□□□□ -1.91
RBM28Q9NW13 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.09□□□□□ -1.91
RBM28Q9NW13 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
RBM28Q9NW13 AC019097.1-201ENST00000424783 735 ntBASIC3.08□□□□□ -1.92
RBM28Q9NW13 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
RBM28Q9NW13 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms