Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 KCTD9P5-201ENST00000504141 1170 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 AC026427.2-201ENST00000506228 536 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 RNU6-678P-201ENST00000516832 109 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 RPL12P22-201ENST00000519073 490 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 AC245166.1-201ENST00000521012 253 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 AP004247.1-201ENST00000531556 1289 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 AC112187.2-201ENST00000604345 283 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 AC097468.3-201ENST00000607956 456 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 AL360219.1-201ENST00000610230 366 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 MIR3651-201ENST00000630427 90 ntBASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
SMC4Q9NTJ3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AC011460.1-201ENST00000636268 1834 ntBASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 RNU6-754P-201ENST00000391166 107 ntBASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AL512649.1-201ENST00000428997 581 ntBASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 CETN4P-201ENST00000432407 469 ntBASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 FTH1P1-201ENST00000437933 532 ntBASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AL133217.1-201ENST00000450980 425 ntBASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 RPS3AP22-201ENST00000488297 769 ntBASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AC008885.1-201ENST00000514930 301 ntBASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AC125611.2-201ENST00000551907 647 ntBASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AC012493.2-201ENST00000595083 291 ntBASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 CLIC4P2-201ENST00000601934 717 ntBASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AL357094.1-201ENST00000603845 844 ntBASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AC107294.3-201ENST00000609211 526 ntBASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AC009570.1-201ENST00000609599 745 ntBASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AP000254.1-201ENST00000609934 520 ntBASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AC007671.2-201ENST00000637344 619 ntBASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 CUL1P1-201ENST00000509510 2425 ntBASIC3.91□□□□□ -1.78
SMC4Q9NTJ3 AC008568.2-201ENST00000623862 2313 ntBASIC3.9□□□□□ -1.78
SMC4Q9NTJ3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
SMC4Q9NTJ3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 RNU5E-8P-201ENST00000363502 116 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 Y_RNA.169-201ENST00000363745 96 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 MIR491-201ENST00000384877 84 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 AC107081.1-201ENST00000414975 361 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 AL445669.1-201ENST00000426743 755 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 MTND5P25-201ENST00000430499 799 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 RPL35AP22-201ENST00000436855 335 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 AC009969.1-201ENST00000438726 172 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 UQCRHP3-201ENST00000451503 251 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 AP1S2P1-201ENST00000457344 379 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 RNU7-125P-201ENST00000458760 62 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 HSPE1P6-201ENST00000479457 291 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 AC012181.1-201ENST00000479895 423 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 MRPS33P3-201ENST00000513456 322 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 AC008015.1-201ENST00000555505 465 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 MIR544B-201ENST00000582372 78 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 UBE2L4-201ENST00000587688 464 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 BCRP9-201ENST00000605312 388 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 AC004067.1-201ENST00000608733 700 ntBASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.9□□□□□ -1.79
SMC4Q9NTJ3 AL442067.2-201ENST00000614033 363 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms