Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RNU6-1090P-201ENST00000364065 94 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VTA1Q9NP79 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.48□□□□□ -1.69
VTA1Q9NP79 TXNP7-201ENST00000406296 293 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 SNORA3.3-201ENST00000408712 125 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 RNU6-908P-201ENST00000410160 94 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 RNU6-387P-201ENST00000411331 105 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 AC004552.1-201ENST00000419089 348 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 PDSS1P1-201ENST00000422953 1114 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.48□□□□□ -1.69
VTA1Q9NP79 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.48□□□□□ -1.69
VTA1Q9NP79 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.48□□□□□ -1.69
VTA1Q9NP79 AC016691.1-201ENST00000441321 413 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.48□□□□□ -1.69
VTA1Q9NP79 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.48□□□□□ -1.69
VTA1Q9NP79 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.48□□□□□ -1.69
VTA1Q9NP79 RNU6-420P-201ENST00000458780 107 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 GMFBP1-201ENST00000467831 427 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 RPS26P3-201ENST00000470205 348 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 PPIAP15-201ENST00000479662 484 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 AC090543.2-201ENST00000483963 348 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 AC004057.1-201ENST00000485827 348 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.48□□□□□ -1.69
VTA1Q9NP79 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.48□□□□□ -1.69
VTA1Q9NP79 RNU6-352P-201ENST00000516908 107 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 RNU6-1092P-201ENST00000516955 87 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 HMGB1P41-201ENST00000520234 440 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.48□□□□□ -1.69
VTA1Q9NP79 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.48□□□□□ -1.69
VTA1Q9NP79 AC055876.1-202ENST00000567053 138 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 AC087499.8-201ENST00000578406 226 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.48□□□□□ -1.69
VTA1Q9NP79 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.48□□□□□ -1.69
VTA1Q9NP79 AC008638.3-201ENST00000603341 463 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 AL139395.1-201ENST00000603662 160 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 AC012443.1-201ENST00000605605 231 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 DISC2.1-201ENST00000612827 205 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 AC005344.1-201ENST00000613391 459 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 AC015967.1-201ENST00000619893 476 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 AL353748.2-201ENST00000622148 471 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 AL136313.1-201ENST00000624804 202 ntBASIC4.48□□□□□ -1.69
VTA1Q9NP79 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
VTA1Q9NP79 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VTA1Q9NP79 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.48□□□□□ -1.69
VTA1Q9NP79 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
VTA1Q9NP79 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.48□□□□□ -1.69
VTA1Q9NP79 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VTA1Q9NP79 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VTA1Q9NP79 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
VTA1Q9NP79 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.47□□□□□ -1.69
VTA1Q9NP79 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VTA1Q9NP79 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VTA1Q9NP79 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
VTA1Q9NP79 Y_RNA.22-201ENST00000362492 102 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 RNY3P3-201ENST00000363816 102 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 SNORA73.2-201ENST00000364946 201 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 SNORA23-201ENST00000365128 182 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 Y_RNA.367-201ENST00000365544 101 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 RNU6-76P-201ENST00000384060 104 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 RNU6-39P-201ENST00000384344 107 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 MIR1-2-201ENST00000384961 85 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 RNU6-1158P-201ENST00000391167 107 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 AC110754.1-201ENST00000399740 601 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 HSPD1P16-201ENST00000402302 394 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 AL359634.1-202ENST00000404721 284 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 RPS3AP24-201ENST00000407896 734 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.47□□□□□ -1.69
VTA1Q9NP79 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VTA1Q9NP79 JKAMPP1-201ENST00000413804 919 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 RAC1P6-201ENST00000423911 575 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.47□□□□□ -1.69
VTA1Q9NP79 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.47□□□□□ -1.69
VTA1Q9NP79 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.47□□□□□ -1.69
VTA1Q9NP79 AL606489.2-201ENST00000433886 234 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 HMGB1P31-201ENST00000437242 427 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 BNIP3P2-201ENST00000441221 577 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.47□□□□□ -1.69
VTA1Q9NP79 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.47□□□□□ -1.69
VTA1Q9NP79 SNRPGP6-201ENST00000451124 220 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 RPS24P6-201ENST00000452670 400 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 RNU7-182P-201ENST00000459009 62 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 RPS29P25-201ENST00000481709 171 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.47□□□□□ -1.69
VTA1Q9NP79 AC116562.3-201ENST00000506136 177 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.47□□□□□ -1.69
VTA1Q9NP79 RNA5SP154-201ENST00000516193 111 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 AC068587.5-201ENST00000528506 175 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.47□□□□□ -1.69
VTA1Q9NP79 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
VTA1Q9NP79 AF038458.1-201ENST00000588406 262 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 AC174048.1-201ENST00000603389 144 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.47□□□□□ -1.69
VTA1Q9NP79 AL355073.2-201ENST00000612106 557 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 AL020991.1-201ENST00000612314 373 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
VTA1Q9NP79 AP001486.3-201ENST00000615334 372 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.47□□□□□ -1.69
VTA1Q9NP79 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
VTA1Q9NP79 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms