Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RNU6-1226P-201ENST00000384317 107 ntBASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 NPM1P10-201ENST00000398310 865 ntBASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 HMGB3P2-201ENST00000411913 584 ntBASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 LINC01347-201ENST00000417964 355 ntBASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 UBE2V1P6-201ENST00000430840 422 ntBASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 HMGB1P18-201ENST00000438801 619 ntBASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 UBBP3-201ENST00000445497 241 ntBASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 RPS20P22-201ENST00000473700 357 ntBASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 AC007115.1-201ENST00000546853 234 ntBASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 AL138976.2-201ENST00000563989 694 ntBASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 MIR4504-201ENST00000577413 92 ntBASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 AL161734.1-201ENST00000609720 557 ntBASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 AL356118.1-201ENST00000635272 1078 ntBASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 CCT4P2-201ENST00000233836 1548 ntBASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 RNU6-482P-201ENST00000391068 107 ntBASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 RNU4-62P-201ENST00000410125 130 ntBASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 RN7SKP101-201ENST00000411376 320 ntBASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 AL356320.2-201ENST00000417263 507 ntBASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 ZNF72P-201ENST00000425869 1908 ntBASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 AC004022.1-201ENST00000447766 1066 ntBASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 AL021397.1-201ENST00000451806 248 ntBASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 AC104581.2-201ENST00000572227 430 ntBASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 MIR4419B-201ENST00000577260 68 ntBASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 MIR3921-201ENST00000577308 85 ntBASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 AC004775.1-201ENST00000607389 753 ntBASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 AC106028.5-201ENST00000610332 395 ntBASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 AC091953.2-201ENST00000623979 160 ntBASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.65□□□□□ -2.15
KIAA1549Q9HCM3 MTND4P8-201ENST00000514997 1362 ntBASIC1.64□□□□□ -2.15
KIAA1549Q9HCM3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
KIAA1549Q9HCM3 RNA5SP354-201ENST00000391247 136 ntBASIC1.64□□□□□ -2.15
KIAA1549Q9HCM3 SNORA26.9-201ENST00000391322 122 ntBASIC1.64□□□□□ -2.15
KIAA1549Q9HCM3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.64□□□□□ -2.15
KIAA1549Q9HCM3 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.64□□□□□ -2.15
KIAA1549Q9HCM3 AC108667.1-201ENST00000428618 249 ntBASIC1.64□□□□□ -2.15
KIAA1549Q9HCM3 AC087588.1-201ENST00000462203 316 ntBASIC1.64□□□□□ -2.15
KIAA1549Q9HCM3 OR52A4P-202ENST00000481634 799 ntBASIC1.64□□□□□ -2.15
KIAA1549Q9HCM3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.64□□□□□ -2.15
KIAA1549Q9HCM3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.64□□□□□ -2.15
KIAA1549Q9HCM3 U73023.1-201ENST00000603134 700 ntBASIC1.64□□□□□ -2.15
KIAA1549Q9HCM3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.64□□□□□ -2.15
KIAA1549Q9HCM3 AL353748.2-201ENST00000622148 471 ntBASIC1.64□□□□□ -2.15
KIAA1549Q9HCM3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.64□□□□□ -2.15
KIAA1549Q9HCM3 MTCO1P6-201ENST00000481192 1384 ntBASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 NAMPTP2-201ENST00000505629 1115 ntBASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 MTND3P24-201ENST00000506306 329 ntBASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AC113155.1-201ENST00000511141 769 ntBASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AC107393.1-201ENST00000512403 346 ntBASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 RNU6-27P-201ENST00000516146 107 ntBASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AC009268.1-201ENST00000561352 1203 ntBASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AC023824.2-201ENST00000566185 400 ntBASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AP001004.1-201ENST00000582468 324 ntBASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AC025016.1-201ENST00000616746 682 ntBASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AC084768.2-201ENST00000622736 221 ntBASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AL513185.3-201ENST00000433335 1300 ntBASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 DSTNP4-201ENST00000399472 474 ntBASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 MIR1294-201ENST00000408503 142 ntBASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AC010385.1-201ENST00000412374 256 ntBASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AL592045.1-201ENST00000429867 352 ntBASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.63□□□□□ -2.15
KIAA1549Q9HCM3 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms