Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SNORA75-201ENST00000384158 137 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 MIR591-201ENST00000385290 95 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 DEFB108C-201ENST00000400154 252 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 AL359634.1-202ENST00000404721 284 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 Z98941.1-201ENST00000407764 100 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.52□□□□□ -1.85
BRF2Q9HAW0 AL451054.2-201ENST00000420896 202 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.52□□□□□ -1.85
BRF2Q9HAW0 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.52□□□□□ -1.85
BRF2Q9HAW0 GAPDHP17-201ENST00000449858 1001 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.52□□□□□ -1.85
BRF2Q9HAW0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.52□□□□□ -1.85
BRF2Q9HAW0 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.52□□□□□ -1.85
BRF2Q9HAW0 AL133162.1-201ENST00000463228 453 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 RAP1BP2-201ENST00000478270 544 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 AC012181.1-201ENST00000479895 423 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 AL049830.2-201ENST00000480072 201 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
BRF2Q9HAW0 RNU6-579P-201ENST00000516879 102 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 HIGD1AP5-201ENST00000529959 259 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 AC008011.1-201ENST00000545989 227 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.52□□□□□ -1.85
BRF2Q9HAW0 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.52□□□□□ -1.85
BRF2Q9HAW0 AC012213.3-201ENST00000577199 777 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 RN7SL703P-201ENST00000578485 302 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 MIR5047-201ENST00000579212 100 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 AC103987.3-201ENST00000582071 292 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 AC002545.1-201ENST00000592511 181 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.52□□□□□ -1.85
BRF2Q9HAW0 AC015871.2-201ENST00000603605 948 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 AP000860.1-201ENST00000605250 559 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 AC090132.2-201ENST00000615881 347 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 AC072046.2-201ENST00000618366 268 ntBASIC3.52□□□□□ -1.85
BRF2Q9HAW0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.52□□□□□ -1.85
BRF2Q9HAW0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
BRF2Q9HAW0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
BRF2Q9HAW0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.52□□□□□ -1.85
BRF2Q9HAW0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
BRF2Q9HAW0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
BRF2Q9HAW0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.51□□□□□ -1.85
BRF2Q9HAW0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
BRF2Q9HAW0 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
BRF2Q9HAW0 RNU5E-1-201ENST00000362477 120 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 U8.3-201ENST00000363321 132 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 RNU6-1119P-201ENST00000384349 108 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 RNU6-348P-201ENST00000384386 107 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 SNORA11B-201ENST00000408175 129 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 RN7SKP140-201ENST00000411196 284 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 RNU6-195P-201ENST00000411352 109 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 AL139247.1-201ENST00000422768 325 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 AC004975.1-201ENST00000428733 208 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.51□□□□□ -1.85
BRF2Q9HAW0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.51□□□□□ -1.85
BRF2Q9HAW0 CBWD4P-201ENST00000445695 655 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.51□□□□□ -1.85
BRF2Q9HAW0 SNORD97-201ENST00000459187 142 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 AC010631.1-201ENST00000474150 156 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.51□□□□□ -1.85
BRF2Q9HAW0 RNA5SP337-201ENST00000517007 109 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 NRON-201ENST00000517270 370 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 AP003392.2-201ENST00000527269 208 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 AP002963.1-201ENST00000530590 184 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 AC004024.1-201ENST00000549244 247 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.51□□□□□ -1.85
BRF2Q9HAW0 HMGB1P14-201ENST00000557424 591 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.51□□□□□ -1.85
BRF2Q9HAW0 MIR4528-201ENST00000577763 90 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 MIR4293-201ENST00000584305 78 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 BNIP3P33-201ENST00000598912 569 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 AC073648.5-201ENST00000603502 305 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.51□□□□□ -1.85
BRF2Q9HAW0 AC104073.3-201ENST00000610942 955 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 AC091304.9-201ENST00000612091 226 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.51□□□□□ -1.85
BRF2Q9HAW0 AC004696.1-201ENST00000614345 607 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
BRF2Q9HAW0 AC110801.1-201ENST00000623590 212 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 AC068137.4-201ENST00000638485 296 ntBASIC3.51□□□□□ -1.85
BRF2Q9HAW0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
BRF2Q9HAW0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.51□□□□□ -1.85
BRF2Q9HAW0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.51□□□□□ -1.85
BRF2Q9HAW0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.51□□□□□ -1.85
BRF2Q9HAW0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.51□□□□□ -1.85
BRF2Q9HAW0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
BRF2Q9HAW0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BRF2Q9HAW0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BRF2Q9HAW0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BRF2Q9HAW0 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
BRF2Q9HAW0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.5□□□□□ -1.85
BRF2Q9HAW0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
BRF2Q9HAW0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.5□□□□□ -1.85
BRF2Q9HAW0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
BRF2Q9HAW0 RNA5SP42-201ENST00000364278 115 ntBASIC3.5□□□□□ -1.85
BRF2Q9HAW0 SNORA20.2-201ENST00000383922 131 ntBASIC3.5□□□□□ -1.85
BRF2Q9HAW0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.5□□□□□ -1.85
BRF2Q9HAW0 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.5□□□□□ -1.85
BRF2Q9HAW0 RNU6-248P-201ENST00000410720 107 ntBASIC3.5□□□□□ -1.85
BRF2Q9HAW0 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.5□□□□□ -1.85
BRF2Q9HAW0 AC009237.5-201ENST00000414271 501 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms