Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 HSPD1P16-201ENST00000402302 394 ntBASIC1.2□□□□□ -2.22
CDH23Q9H251 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.2□□□□□ -2.22
CDH23Q9H251 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.2□□□□□ -2.22
CDH23Q9H251 AC011890.2-201ENST00000613393 294 ntBASIC1.2□□□□□ -2.22
CDH23Q9H251 MFSD8-213ENST00000641134 1327 ntBASIC1.2□□□□□ -2.22
CDH23Q9H251 SNORD6-201ENST00000365444 73 ntBASIC1.2□□□□□ -2.22
CDH23Q9H251 SNRPEP10-201ENST00000420249 274 ntBASIC1.2□□□□□ -2.22
CDH23Q9H251 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CDH23Q9H251 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.19□□□□□ -2.22
CDH23Q9H251 AC096571.1-202ENST00000506634 735 ntBASIC1.19□□□□□ -2.22
CDH23Q9H251 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CDH23Q9H251 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
CDH23Q9H251 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.19□□□□□ -2.22
CDH23Q9H251 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.19□□□□□ -2.22
CDH23Q9H251 AC073901.1-201ENST00000462471 408 ntBASIC1.19□□□□□ -2.22
CDH23Q9H251 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
CDH23Q9H251 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.19□□□□□ -2.22
CDH23Q9H251 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.19□□□□□ -2.22
CDH23Q9H251 Y_RNA.60-201ENST00000362831 98 ntBASIC1.19□□□□□ -2.22
CDH23Q9H251 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.19□□□□□ -2.22
CDH23Q9H251 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.19□□□□□ -2.22
CDH23Q9H251 AC093801.2-201ENST00000503966 1050 ntBASIC1.19□□□□□ -2.22
CDH23Q9H251 RNU4-60P-201ENST00000517239 135 ntBASIC1.19□□□□□ -2.22
CDH23Q9H251 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.19□□□□□ -2.22
CDH23Q9H251 AL590095.2-201ENST00000604136 117 ntBASIC1.19□□□□□ -2.22
CDH23Q9H251 AL445687.1-201ENST00000439946 251 ntBASIC1.18□□□□□ -2.22
CDH23Q9H251 AC004022.1-201ENST00000447766 1066 ntBASIC1.18□□□□□ -2.22
CDH23Q9H251 AC123912.5-201ENST00000605470 343 ntBASIC1.18□□□□□ -2.22
CDH23Q9H251 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC1.18□□□□□ -2.22
CDH23Q9H251 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CDH23Q9H251 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.18□□□□□ -2.22
CDH23Q9H251 DUXAP11-201ENST00000603858 526 ntBASIC1.18□□□□□ -2.22
CDH23Q9H251 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
CDH23Q9H251 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CDH23Q9H251 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
CDH23Q9H251 AL596276.1-201ENST00000434465 418 ntBASIC1.17□□□□□ -2.22
CDH23Q9H251 AP004242.1-201ENST00000533701 349 ntBASIC1.17□□□□□ -2.22
CDH23Q9H251 AC233266.2-201ENST00000567067 528 ntBASIC1.17□□□□□ -2.22
CDH23Q9H251 MIR6513-201ENST00000621188 64 ntBASIC1.17□□□□□ -2.22
CDH23Q9H251 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.17□□□□□ -2.22
CDH23Q9H251 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
CDH23Q9H251 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CDH23Q9H251 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CDH23Q9H251 U8.9-201ENST00000365667 134 ntBASIC1.17□□□□□ -2.22
CDH23Q9H251 Y_RNA.390-201ENST00000383932 102 ntBASIC1.17□□□□□ -2.22
CDH23Q9H251 AC002524.1-201ENST00000411687 547 ntBASIC1.17□□□□□ -2.22
CDH23Q9H251 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.17□□□□□ -2.22
CDH23Q9H251 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.17□□□□□ -2.22
CDH23Q9H251 MIR4714-201ENST00000580728 77 ntBASIC1.17□□□□□ -2.22
CDH23Q9H251 AC021755.4-201ENST00000616620 456 ntBASIC1.17□□□□□ -2.22
CDH23Q9H251 AC025263.3-201ENST00000622965 1396 ntBASIC1.17□□□□□ -2.22
CDH23Q9H251 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.17□□□□□ -2.22
CDH23Q9H251 AC073264.1-201ENST00000411508 416 ntBASIC1.17□□□□□ -2.22
CDH23Q9H251 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC1.17□□□□□ -2.22
CDH23Q9H251 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.17□□□□□ -2.22
CDH23Q9H251 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.17□□□□□ -2.22
CDH23Q9H251 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CDH23Q9H251 ICE2P2-201ENST00000483823 2787 ntBASIC1.16□□□□□ -2.22
CDH23Q9H251 DEFB108F-201ENST00000344638 222 ntBASIC1.16□□□□□ -2.22
CDH23Q9H251 HMGN2P35-201ENST00000412164 270 ntBASIC1.16□□□□□ -2.22
CDH23Q9H251 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.16□□□□□ -2.22
CDH23Q9H251 CBX3P6-201ENST00000430257 527 ntBASIC1.16□□□□□ -2.22
CDH23Q9H251 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.16□□□□□ -2.22
CDH23Q9H251 AC087343.1-201ENST00000477341 475 ntBASIC1.16□□□□□ -2.22
CDH23Q9H251 EEF1B2P4-201ENST00000551398 348 ntBASIC1.16□□□□□ -2.22
CDH23Q9H251 AC025918.2-201ENST00000558683 763 ntBASIC1.16□□□□□ -2.22
CDH23Q9H251 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CDH23Q9H251 AC211469.2-201ENST00000605461 205 ntBASIC1.16□□□□□ -2.22
CDH23Q9H251 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.16□□□□□ -2.22
CDH23Q9H251 SUMO2P12-201ENST00000405924 140 ntBASIC1.16□□□□□ -2.22
CDH23Q9H251 AL030996.1-201ENST00000411430 235 ntBASIC1.16□□□□□ -2.22
CDH23Q9H251 AL096701.2-201ENST00000416920 238 ntBASIC1.16□□□□□ -2.22
CDH23Q9H251 RPL21P131-201ENST00000497298 483 ntBASIC1.16□□□□□ -2.22
CDH23Q9H251 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.16□□□□□ -2.22
CDH23Q9H251 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.16□□□□□ -2.22
CDH23Q9H251 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CDH23Q9H251 AL357078.2-201ENST00000416486 427 ntBASIC1.16□□□□□ -2.22
CDH23Q9H251 ZNF734P-201ENST00000419494 1534 ntBASIC1.16□□□□□ -2.22
CDH23Q9H251 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.16□□□□□ -2.22
CDH23Q9H251 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.16□□□□□ -2.22
CDH23Q9H251 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1.16□□□□□ -2.22
CDH23Q9H251 AL512605.2-201ENST00000592972 256 ntBASIC1.16□□□□□ -2.22
CDH23Q9H251 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.15□□□□□ -2.22
CDH23Q9H251 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.15□□□□□ -2.22
CDH23Q9H251 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC1.15□□□□□ -2.22
CDH23Q9H251 FO393415.2-201ENST00000480085 343 ntBASIC1.15□□□□□ -2.22
CDH23Q9H251 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.15□□□□□ -2.22
CDH23Q9H251 AP003072.2-201ENST00000527756 676 ntBASIC1.15□□□□□ -2.22
CDH23Q9H251 AL161713.1-201ENST00000555538 145 ntBASIC1.15□□□□□ -2.22
CDH23Q9H251 AL031775.1-201ENST00000607014 887 ntBASIC1.15□□□□□ -2.22
CDH23Q9H251 Z86062.1-201ENST00000406773 777 ntBASIC1.15□□□□□ -2.23
CDH23Q9H251 HMGN2P38-201ENST00000423806 265 ntBASIC1.15□□□□□ -2.23
CDH23Q9H251 RPL23AP35-201ENST00000451906 501 ntBASIC1.15□□□□□ -2.23
CDH23Q9H251 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.15□□□□□ -2.23
CDH23Q9H251 AC093752.1-206ENST00000511823 336 ntBASIC1.15□□□□□ -2.23
CDH23Q9H251 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.15□□□□□ -2.23
CDH23Q9H251 AC005498.1-201ENST00000592125 465 ntBASIC1.15□□□□□ -2.23
CDH23Q9H251 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.14□□□□□ -2.23
CDH23Q9H251 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.14□□□□□ -2.23
CDH23Q9H251 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms