Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC009296.1-201ENST00000443146 155 ntBASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 DDX3P2-201ENST00000446138 111 ntBASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 HSFY5P-201ENST00000453726 309 ntBASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 RNU7-23P-201ENST00000459465 62 ntBASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 AL135752.1-201ENST00000479477 471 ntBASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 HIGD1AP13-201ENST00000509878 289 ntBASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 SNORA9.3-201ENST00000516383 129 ntBASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 MTCYBP23-201ENST00000558717 1102 ntBASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 ZNF861P-201ENST00000588126 639 ntBASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 AC068313.1-201ENST00000604028 1008 ntBASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 AC099654.9-201ENST00000637055 678 ntBASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.96
POLR1EQ9GZS1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.96
POLR1EQ9GZS1 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 RNU5E-8P-201ENST00000363502 116 ntBASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 RNU6-637P-201ENST00000384050 107 ntBASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 SNORA18.3-201ENST00000384122 132 ntBASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 AC093156.1-201ENST00000440382 670 ntBASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 BMI1P1-201ENST00000445879 941 ntBASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 AC002381.1-201ENST00000447049 280 ntBASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 AC003982.1-202ENST00000469928 248 ntBASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 RPS3AP14-201ENST00000483907 780 ntBASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 AP001025.2-201ENST00000490908 477 ntBASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 OR5BM1P-201ENST00000512021 366 ntBASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 AC091826.1-201ENST00000514065 313 ntBASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 AL355836.1-201ENST00000555951 870 ntBASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 MIR3605-201ENST00000583214 100 ntBASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 AC006504.3-201ENST00000586818 523 ntBASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 AL139022.2-201ENST00000606934 443 ntBASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 AL157392.4-201ENST00000609756 345 ntBASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 AL603758.1-201ENST00000618654 241 ntBASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 AC103798.2-201ENST00000624292 632 ntBASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 AL390862.1-201ENST00000635467 1469 ntBASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.83□□□□□ -1.96
POLR1EQ9GZS1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 NACA3P-201ENST00000359690 648 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 SNORD116.1-201ENST00000365628 92 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 RNU1-109P-201ENST00000383960 147 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 ERHP2-201ENST00000402323 299 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 AL136310.1-201ENST00000404926 654 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 RPS3AP37-201ENST00000419176 745 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 AC009414.1-201ENST00000427200 443 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 AL390023.1-201ENST00000428836 262 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 AC087499.2-201ENST00000432861 149 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 AC107083.1-201ENST00000439643 279 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 RPS24P13-201ENST00000442520 397 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 RPL39P40-201ENST00000445481 146 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 SNORD121B-201ENST00000458838 81 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 AC087588.1-201ENST00000462203 316 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 RPL31P50-201ENST00000471002 296 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 SEM1P1-201ENST00000506694 209 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 MTATP6P9-201ENST00000515039 680 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 RNU6-150P-201ENST00000516237 95 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 RNA5SP291-201ENST00000517222 105 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 AL132857.1-201ENST00000555180 708 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 BNIP3P26-201ENST00000600827 554 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 AL137843.1-201ENST00000605078 385 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 AC069234.5-201ENST00000611056 416 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 AL137790.1-201ENST00000634283 177 ntBASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
POLR1EQ9GZS1 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.81□□□□□ -1.96
POLR1EQ9GZS1 RNU6-359P-201ENST00000365466 108 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms