Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AL360271.2-201ENST00000447710 161 ntBASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 AC009901.1-201ENST00000506703 541 ntBASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 MTND3P25-201ENST00000509243 135 ntBASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 Y_RNA.691-201ENST00000516611 103 ntBASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 MIR3942-201ENST00000585264 109 ntBASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 AC004825.2-201ENST00000616634 455 ntBASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRAIPQ9BWF2 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.4□□□□□ -1.55
TRAIPQ9BWF2 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
TRAIPQ9BWF2 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRAIPQ9BWF2 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TRAIPQ9BWF2 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 AP001642.1-201ENST00000624727 2117 ntBASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 AL133383.2-201ENST00000622958 2336 ntBASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 RNU6-266P-201ENST00000364225 107 ntBASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 Y_RNA.301-201ENST00000364990 103 ntBASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 AC074085.1-201ENST00000413598 418 ntBASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 AL158071.1-201ENST00000430315 461 ntBASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 AMD1P1-201ENST00000457220 922 ntBASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 RPL23AP56-201ENST00000460778 453 ntBASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 RPS17P2-201ENST00000461663 408 ntBASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 RNU6-1069P-201ENST00000516612 133 ntBASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 RNU6-566P-201ENST00000516790 107 ntBASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 RNA5SP392-201ENST00000516905 112 ntBASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 GLYCAM1-201ENST00000546596 285 ntBASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 AL355375.2-201ENST00000574825 175 ntBASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 MIR4790-201ENST00000577799 79 ntBASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 MIR5692C1-201ENST00000585309 91 ntBASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 AC073539.2-201ENST00000597113 165 ntBASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 AC113139.1-201ENST00000605049 239 ntBASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TRAIPQ9BWF2 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 RAB28P1-201ENST00000411517 641 ntBASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 AL353621.1-201ENST00000418219 243 ntBASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 AC092047.1-201ENST00000424997 240 ntBASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 SNAP23P1-201ENST00000433229 246 ntBASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 AC236972.2-201ENST00000434979 310 ntBASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 RANP8-201ENST00000444720 713 ntBASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 RPL9P32-201ENST00000464118 620 ntBASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 OR51K1P-201ENST00000510214 950 ntBASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 MIR892C-201ENST00000516410 77 ntBASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 AC007151.1-201ENST00000572774 483 ntBASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 AC136601.2-201ENST00000604356 474 ntBASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 NUTF2P8-201ENST00000604593 363 ntBASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 AC002044.1-201ENST00000606707 158 ntBASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 MIR7703-201ENST00000620784 77 ntBASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 AC027309.3-201ENST00000623419 351 ntBASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 AC022336.2-201ENST00000568966 2538 ntBASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TRAIPQ9BWF2 NCAPGP1-201ENST00000505112 1814 ntBASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 AL035079.1-201ENST00000405210 287 ntBASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 AL591034.1-201ENST00000407447 340 ntBASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 BX510359.2-201ENST00000417920 305 ntBASIC5.37□□□□□ -1.55
TRAIPQ9BWF2 RPS15AP6-201ENST00000420703 385 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms