Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 AC104118.1-201ENST00000607625 1589 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 Y_RNA.2-201ENST00000362330 96 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 Y_RNA.39-201ENST00000362620 98 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 Y_RNA.257-201ENST00000364596 102 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 AL603908.1-201ENST00000406098 201 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 RPL7AP73-201ENST00000413490 353 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 AL669831.1-202ENST00000428504 417 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 COX6CP13-201ENST00000428703 226 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 AL450023.3-201ENST00000440592 271 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 AC092647.2-201ENST00000452998 253 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 AL583843.1-201ENST00000456070 346 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 RPS17P2-201ENST00000461663 408 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 RN7SL443P-201ENST00000464331 290 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 HMGB3P16-201ENST00000508037 287 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 AC104136.1-201ENST00000512969 394 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 RN7SKP258-201ENST00000517151 304 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 HMGN2P6-201ENST00000551091 273 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 SNORD84-203ENST00000584275 78 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 AC011494.1-201ENST00000596454 237 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 AL355297.3-201ENST00000604082 446 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 RNA5SP108-201ENST00000605921 117 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 AL161423.1-201ENST00000613700 262 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 SDR42E1P2-201ENST00000614861 481 ntBASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM56Q9BRZ2 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
TRIM56Q9BRZ2 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 Y_RNA.380-201ENST00000365663 111 ntBASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 UBBP2-201ENST00000376781 231 ntBASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 SNORA70.10-201ENST00000384515 134 ntBASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 RNU4-70P-201ENST00000384579 139 ntBASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 RNU6-1109P-201ENST00000391187 107 ntBASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 MIR1271-201ENST00000408537 86 ntBASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 RN7SKP114-201ENST00000410327 279 ntBASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 RN7SKP126-201ENST00000411143 300 ntBASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 RPL35AP21-201ENST00000437667 333 ntBASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 AL589765.3-201ENST00000446084 462 ntBASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 RPS23P1-201ENST00000491662 432 ntBASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 AC072052.1-201ENST00000496556 306 ntBASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 RNU4-60P-201ENST00000517239 135 ntBASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 AC020634.1-201ENST00000608701 549 ntBASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 U2.1-201ENST00000618978 145 ntBASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 AC067931.1-201ENST00000624190 671 ntBASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 AC126323.6-202ENST00000568092 3511 ntBASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM56Q9BRZ2 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 RNU6-26P-201ENST00000383985 107 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 Y_RNA.424-201ENST00000384063 103 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 SNORA51.8-201ENST00000384234 132 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 RNU6-306P-201ENST00000384617 107 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 SNORA41-201ENST00000384675 132 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 AL133270.1-201ENST00000402635 279 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 RNU2-23P-201ENST00000410545 195 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 AL356968.1-201ENST00000416622 474 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 USP9YP30-201ENST00000430729 455 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 RHOT1P3-201ENST00000436571 331 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 RPS24P13-201ENST00000442520 397 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 RPL34P20-201ENST00000442771 351 ntBASIC5.07□□□□□ -1.6
TRIM56Q9BRZ2 AL591623.2-201ENST00000449978 222 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms