Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 CUL1P1-201ENST00000509510 2425 ntBASIC3.21□□□□□ -1.9
CPNE1Q99829 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CPNE1Q99829 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CPNE1Q99829 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CPNE1Q99829 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.2□□□□□ -1.9
CPNE1Q99829 RNU5A-8P-201ENST00000364102 114 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 RNA5SP479-201ENST00000364858 117 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 SNORA46-201ENST00000384762 135 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 MIR514A1-201ENST00000385133 98 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 SNORD115.1-201ENST00000391109 76 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 RPL21P3-201ENST00000395517 478 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 TXNP7-201ENST00000406296 293 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 NDUFB4P7-201ENST00000423198 363 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 AL353777.1-201ENST00000425552 326 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.2□□□□□ -1.9
CPNE1Q99829 NDUFB4P6-201ENST00000436819 366 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 MTCO3P45-201ENST00000443036 613 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.2□□□□□ -1.9
CPNE1Q99829 ELOCP30-201ENST00000447108 299 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 ELOCP23-201ENST00000452014 332 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 MTND2P24-201ENST00000453434 806 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.2□□□□□ -1.9
CPNE1Q99829 AC108059.3-201ENST00000456388 214 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.2□□□□□ -1.9
CPNE1Q99829 AC146507.2-201ENST00000460608 476 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 RPS27AP1-201ENST00000475545 471 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 AL049874.1-201ENST00000489560 388 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CPNE1Q99829 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.2□□□□□ -1.9
CPNE1Q99829 PHBP14-201ENST00000512887 367 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 AC010265.1-201ENST00000513509 211 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.2□□□□□ -1.9
CPNE1Q99829 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.2□□□□□ -1.9
CPNE1Q99829 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.2□□□□□ -1.9
CPNE1Q99829 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.2□□□□□ -1.9
CPNE1Q99829 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.2□□□□□ -1.9
CPNE1Q99829 AC106785.1-201ENST00000565935 262 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 AL356432.3-201ENST00000568952 465 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 MIR5697-201ENST00000578045 78 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 AL031775.1-201ENST00000607014 887 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 AC027807.2-201ENST00000616099 408 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 AC002076.2-201ENST00000617362 122 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 AC009159.1-201ENST00000618386 642 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 AC039056.2-201ENST00000622261 511 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.2□□□□□ -1.9
CPNE1Q99829 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.2□□□□□ -1.9
CPNE1Q99829 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.2□□□□□ -1.9
CPNE1Q99829 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CPNE1Q99829 AC007256.1-201ENST00000392253 2765 ntBASIC3.2□□□□□ -1.9
CPNE1Q99829 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CPNE1Q99829 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CPNE1Q99829 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.19□□□□□ -1.9
CPNE1Q99829 RNU5E-5P-201ENST00000365379 116 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.19□□□□□ -1.9
CPNE1Q99829 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.19□□□□□ -1.9
CPNE1Q99829 RNU6-278P-201ENST00000390945 109 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AC110754.1-201ENST00000399740 601 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 FAT1P1-201ENST00000406588 507 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.19□□□□□ -1.9
CPNE1Q99829 RPS29P4-201ENST00000414733 161 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.19□□□□□ -1.9
CPNE1Q99829 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AC090960.1-201ENST00000421072 306 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.19□□□□□ -1.9
CPNE1Q99829 TMEM167AP1-201ENST00000423409 219 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.19□□□□□ -1.9
CPNE1Q99829 AL590383.1-201ENST00000428602 75 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.19□□□□□ -1.9
CPNE1Q99829 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.19□□□□□ -1.9
CPNE1Q99829 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CPNE1Q99829 RPS12P18-201ENST00000442381 270 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AL590365.1-201ENST00000450788 243 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AL359385.1-201ENST00000456509 365 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 RNA5SP310-201ENST00000459084 116 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AC092754.2-201ENST00000463506 460 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AC116337.2-201ENST00000477662 156 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.19□□□□□ -1.9
CPNE1Q99829 CDC42P4-201ENST00000510507 563 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 SCARNA15.2-201ENST00000516409 127 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.19□□□□□ -1.9
CPNE1Q99829 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.19□□□□□ -1.9
CPNE1Q99829 MTCO1P49-201ENST00000523429 802 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AL355836.1-201ENST00000555951 870 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 ZNF519P3-201ENST00000557158 1032 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 MIR2682-201ENST00000580305 110 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.19□□□□□ -1.9
CPNE1Q99829 MIR3922-201ENST00000585192 84 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AF038458.1-201ENST00000588406 262 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.19□□□□□ -1.9
CPNE1Q99829 AL359999.1-201ENST00000604513 294 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AC105129.3-201ENST00000605455 485 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 SNORA51-201ENST00000606420 132 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AC103710.1-201ENST00000610003 901 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AC090970.3-201ENST00000612566 866 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 uc_338.25-201ENST00000613756 156 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AC104010.1-201ENST00000616889 150 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 PLCE1P1-201ENST00000622094 305 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.19□□□□□ -1.9
CPNE1Q99829 AC012442.3-202ENST00000636742 206 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms