Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 VTA1P2-201ENST00000520205 911 ntBASIC1.14□□□□□ -2.23
SPENQ96T58 AC010928.2-201ENST00000588017 287 ntBASIC1.14□□□□□ -2.23
SPENQ96T58 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.14□□□□□ -2.23
SPENQ96T58 AC006329.2-201ENST00000611491 394 ntBASIC1.14□□□□□ -2.23
SPENQ96T58 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
SPENQ96T58 RNU6-115P-201ENST00000364310 107 ntBASIC1.14□□□□□ -2.23
SPENQ96T58 HMGB1P13-201ENST00000406019 642 ntBASIC1.14□□□□□ -2.23
SPENQ96T58 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.14□□□□□ -2.23
SPENQ96T58 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.14□□□□□ -2.23
SPENQ96T58 ARL5AP3-201ENST00000439327 386 ntBASIC1.14□□□□□ -2.23
SPENQ96T58 RNA5SP384-201ENST00000516615 116 ntBASIC1.14□□□□□ -2.23
SPENQ96T58 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.14□□□□□ -2.23
SPENQ96T58 Y_RNA.274-201ENST00000364714 101 ntBASIC1.13□□□□□ -2.23
SPENQ96T58 RNU1-78P-201ENST00000391248 165 ntBASIC1.13□□□□□ -2.23
SPENQ96T58 HMGN1P14-201ENST00000412459 517 ntBASIC1.13□□□□□ -2.23
SPENQ96T58 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.13□□□□□ -2.23
SPENQ96T58 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.13□□□□□ -2.23
SPENQ96T58 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.13□□□□□ -2.23
SPENQ96T58 SNRPFP3-201ENST00000457792 225 ntBASIC1.13□□□□□ -2.23
SPENQ96T58 AC008427.1-201ENST00000503102 655 ntBASIC1.13□□□□□ -2.23
SPENQ96T58 LRRC34P2-201ENST00000514850 553 ntBASIC1.13□□□□□ -2.23
SPENQ96T58 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SPENQ96T58 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.13□□□□□ -2.23
SPENQ96T58 MAGOH2P-202ENST00000584384 429 ntBASIC1.13□□□□□ -2.23
SPENQ96T58 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.13□□□□□ -2.23
SPENQ96T58 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
SPENQ96T58 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.13□□□□□ -2.23
SPENQ96T58 RPL31P35-201ENST00000431058 377 ntBASIC1.13□□□□□ -2.23
SPENQ96T58 TRAV31-201ENST00000502780 342 ntBASIC1.13□□□□□ -2.23
SPENQ96T58 Y_RNA.60-201ENST00000362831 98 ntBASIC1.13□□□□□ -2.23
SPENQ96T58 MIR1304-201ENST00000408243 91 ntBASIC1.13□□□□□ -2.23
SPENQ96T58 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.13□□□□□ -2.23
SPENQ96T58 AC018630.2-202ENST00000422992 927 ntBASIC1.13□□□□□ -2.23
SPENQ96T58 SNRPGP13-201ENST00000442212 177 ntBASIC1.13□□□□□ -2.23
SPENQ96T58 VN1R96P-201ENST00000446052 858 ntBASIC1.13□□□□□ -2.23
SPENQ96T58 DNAJC8P1-201ENST00000554535 372 ntBASIC1.13□□□□□ -2.23
SPENQ96T58 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SPENQ96T58 AL138955.1-201ENST00000622881 1040 ntBASIC1.13□□□□□ -2.23
SPENQ96T58 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SPENQ96T58 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.12□□□□□ -2.23
SPENQ96T58 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.12□□□□□ -2.23
SPENQ96T58 uc_338.20-201ENST00000621563 178 ntBASIC1.12□□□□□ -2.23
SPENQ96T58 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.12□□□□□ -2.23
SPENQ96T58 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.12□□□□□ -2.23
SPENQ96T58 MTCYBP37-201ENST00000510642 1133 ntBASIC1.12□□□□□ -2.23
SPENQ96T58 AC013553.2-201ENST00000604244 589 ntBASIC1.12□□□□□ -2.23
SPENQ96T58 AC116447.1-201ENST00000613153 453 ntBASIC1.12□□□□□ -2.23
SPENQ96T58 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.12□□□□□ -2.23
SPENQ96T58 RNU1-148P-201ENST00000384472 162 ntBASIC1.12□□□□□ -2.23
SPENQ96T58 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
SPENQ96T58 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.12□□□□□ -2.23
SPENQ96T58 OR51B8P-201ENST00000449892 769 ntBASIC1.12□□□□□ -2.23
SPENQ96T58 AL109653.1-201ENST00000603091 248 ntBASIC1.12□□□□□ -2.23
SPENQ96T58 AL445493.3-201ENST00000619568 477 ntBASIC1.12□□□□□ -2.23
SPENQ96T58 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
SPENQ96T58 MFSD8-213ENST00000641134 1327 ntBASIC1.12□□□□□ -2.23
SPENQ96T58 MTND5P25-201ENST00000430499 799 ntBASIC1.11□□□□□ -2.23
SPENQ96T58 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.11□□□□□ -2.23
SPENQ96T58 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
SPENQ96T58 AC107918.3-201ENST00000533272 382 ntBASIC1.11□□□□□ -2.23
SPENQ96T58 HSPE1P3-201ENST00000559254 309 ntBASIC1.11□□□□□ -2.23
SPENQ96T58 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.11□□□□□ -2.23
SPENQ96T58 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.11□□□□□ -2.23
SPENQ96T58 AC010487.4-201ENST00000637027 61 ntBASIC1.11□□□□□ -2.23
SPENQ96T58 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.11□□□□□ -2.23
SPENQ96T58 RNA5SP489-201ENST00000410986 109 ntBASIC1.11□□□□□ -2.23
SPENQ96T58 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.11□□□□□ -2.23
SPENQ96T58 RPS23P4-201ENST00000487908 423 ntBASIC1.11□□□□□ -2.23
SPENQ96T58 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.11□□□□□ -2.23
SPENQ96T58 DUXAP5-201ENST00000529668 529 ntBASIC1.11□□□□□ -2.23
SPENQ96T58 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.11□□□□□ -2.23
SPENQ96T58 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.11□□□□□ -2.23
SPENQ96T58 AL020996.3-201ENST00000606617 222 ntBASIC1.11□□□□□ -2.23
SPENQ96T58 AL109933.3-201ENST00000619095 188 ntBASIC1.11□□□□□ -2.23
SPENQ96T58 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SPENQ96T58 RNU6-716P-201ENST00000365621 103 ntBASIC1.11□□□□□ -2.23
SPENQ96T58 AC096571.1-202ENST00000506634 735 ntBASIC1.11□□□□□ -2.23
SPENQ96T58 AC068446.3-201ENST00000555285 382 ntBASIC1.11□□□□□ -2.23
SPENQ96T58 AC135776.4-201ENST00000624300 1904 ntBASIC1.11□□□□□ -2.23
SPENQ96T58 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.11□□□□□ -2.23
SPENQ96T58 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.1□□□□□ -2.23
SPENQ96T58 AP004242.1-201ENST00000533701 349 ntBASIC1.1□□□□□ -2.23
SPENQ96T58 AC007229.1-201ENST00000590455 412 ntBASIC1.1□□□□□ -2.23
SPENQ96T58 MIR2909-201ENST00000617113 69 ntBASIC1.1□□□□□ -2.23
SPENQ96T58 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SPENQ96T58 DPPA2P1-201ENST00000428060 556 ntBASIC1.1□□□□□ -2.23
SPENQ96T58 Y_RNA.675-201ENST00000516389 149 ntBASIC1.1□□□□□ -2.23
SPENQ96T58 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1.1□□□□□ -2.23
SPENQ96T58 AC007375.1-201ENST00000554513 578 ntBASIC1.1□□□□□ -2.23
SPENQ96T58 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.1□□□□□ -2.23
SPENQ96T58 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
SPENQ96T58 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.1□□□□□ -2.23
SPENQ96T58 USP9YP7-201ENST00000436723 430 ntBASIC1.1□□□□□ -2.23
SPENQ96T58 USP9YP32-201ENST00000452432 430 ntBASIC1.1□□□□□ -2.23
SPENQ96T58 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.1□□□□□ -2.23
SPENQ96T58 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.1□□□□□ -2.23
SPENQ96T58 RNA5SP354-201ENST00000391247 136 ntBASIC1.09□□□□□ -2.23
SPENQ96T58 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.09□□□□□ -2.23
SPENQ96T58 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC1.09□□□□□ -2.23
SPENQ96T58 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms