Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 RPS3AP4-201ENST00000555161 764 ntBASIC1.97□□□□□ -2.09
CDK5RAP2Q96SN8 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.97□□□□□ -2.09
CDK5RAP2Q96SN8 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.97□□□□□ -2.09
CDK5RAP2Q96SN8 AC012360.2-201ENST00000609349 391 ntBASIC1.97□□□□□ -2.09
CDK5RAP2Q96SN8 AC140725.3-201ENST00000616193 880 ntBASIC1.97□□□□□ -2.09
CDK5RAP2Q96SN8 AC095031.1-201ENST00000623685 672 ntBASIC1.97□□□□□ -2.09
CDK5RAP2Q96SN8 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CDK5RAP2Q96SN8 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CDK5RAP2Q96SN8 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CDK5RAP2Q96SN8 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CDK5RAP2Q96SN8 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CDK5RAP2Q96SN8 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CDK5RAP2Q96SN8 RNU6-185P-201ENST00000384421 107 ntBASIC1.96□□□□□ -2.1
CDK5RAP2Q96SN8 TPT1P14-201ENST00000448018 505 ntBASIC1.96□□□□□ -2.1
CDK5RAP2Q96SN8 AL139109.1-201ENST00000455491 297 ntBASIC1.96□□□□□ -2.1
CDK5RAP2Q96SN8 ERHP1-201ENST00000523006 310 ntBASIC1.96□□□□□ -2.1
CDK5RAP2Q96SN8 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.96□□□□□ -2.1
CDK5RAP2Q96SN8 MIR8081-201ENST00000611533 95 ntBASIC1.96□□□□□ -2.1
CDK5RAP2Q96SN8 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CDK5RAP2Q96SN8 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CDK5RAP2Q96SN8 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CDK5RAP2Q96SN8 Y_RNA.466-201ENST00000384294 113 ntBASIC1.95□□□□□ -2.1
CDK5RAP2Q96SN8 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CDK5RAP2Q96SN8 Z75741.2-201ENST00000417272 1167 ntBASIC1.95□□□□□ -2.1
CDK5RAP2Q96SN8 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.95□□□□□ -2.1
CDK5RAP2Q96SN8 AP002345.1-201ENST00000456493 928 ntBASIC1.95□□□□□ -2.1
CDK5RAP2Q96SN8 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.95□□□□□ -2.1
CDK5RAP2Q96SN8 TRMT112P2-201ENST00000512910 132 ntBASIC1.95□□□□□ -2.1
CDK5RAP2Q96SN8 RNU4-18P-201ENST00000516751 149 ntBASIC1.95□□□□□ -2.1
CDK5RAP2Q96SN8 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.95□□□□□ -2.1
CDK5RAP2Q96SN8 AP001804.3-201ENST00000525146 880 ntBASIC1.95□□□□□ -2.1
CDK5RAP2Q96SN8 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.95□□□□□ -2.1
CDK5RAP2Q96SN8 AL158801.5-201ENST00000623123 465 ntBASIC1.95□□□□□ -2.1
CDK5RAP2Q96SN8 AL109809.4-201ENST00000603520 2185 ntBASIC1.95□□□□□ -2.1
CDK5RAP2Q96SN8 AL354685.2-201ENST00000448218 1447 ntBASIC1.95□□□□□ -2.1
CDK5RAP2Q96SN8 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 MIR489-201ENST00000384923 84 ntBASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 RNA5SP252-201ENST00000391131 119 ntBASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 AC114973.1-201ENST00000429057 632 ntBASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 IFNA20P-201ENST00000436840 528 ntBASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 FABP5P6-201ENST00000510588 409 ntBASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 AC008494.2-201ENST00000514544 370 ntBASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 RNA5SP364-201ENST00000516938 78 ntBASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 AC010546.1-201ENST00000569391 485 ntBASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 ZNF876P-202ENST00000398732 1485 ntBASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 MIR499A-201ENST00000384903 122 ntBASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 TATDN1P1-201ENST00000414123 891 ntBASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 TMEM167AP1-201ENST00000423409 219 ntBASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 AC092473.1-201ENST00000441098 221 ntBASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 snoU13.4-201ENST00000458916 104 ntBASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 RNF138P1-201ENST00000502765 546 ntBASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 AL136363.1-201ENST00000605349 337 ntBASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 AL449363.1-201ENST00000617815 186 ntBASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.94□□□□□ -2.1
CDK5RAP2Q96SN8 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 SNORA16.1-201ENST00000364597 132 ntBASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 MIR767-201ENST00000390228 109 ntBASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 SNRPEP2-201ENST00000397592 279 ntBASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 AP000275.1-201ENST00000411943 390 ntBASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 AL009174.1-201ENST00000426577 416 ntBASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 MRPL42P6-201ENST00000486397 371 ntBASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 AL645939.4-201ENST00000604495 135 ntBASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 MIR6840-201ENST00000611937 71 ntBASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 SGO1P2-201ENST00000429458 1589 ntBASIC1.93□□□□□ -2.1
CDK5RAP2Q96SN8 AL139276.1-201ENST00000311910 1001 ntBASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 AL596028.1-201ENST00000326971 197 ntBASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 AC099677.1-201ENST00000420575 175 ntBASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 AL645638.1-201ENST00000440519 361 ntBASIC1.92□□□□□ -2.1
CDK5RAP2Q96SN8 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms