Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AL034374.1-201ENST00000406329 351 ntBASIC2.35□□□□□ -2.03
IFT140Q96RY7 TRGV6-201ENST00000417928 299 ntBASIC2.35□□□□□ -2.03
IFT140Q96RY7 AL445669.1-201ENST00000426743 755 ntBASIC2.35□□□□□ -2.03
IFT140Q96RY7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
IFT140Q96RY7 COX6CP14-201ENST00000469580 174 ntBASIC2.35□□□□□ -2.03
IFT140Q96RY7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.35□□□□□ -2.03
IFT140Q96RY7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.35□□□□□ -2.03
IFT140Q96RY7 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.35□□□□□ -2.03
IFT140Q96RY7 AC084364.2-201ENST00000546924 395 ntBASIC2.35□□□□□ -2.03
IFT140Q96RY7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.35□□□□□ -2.03
IFT140Q96RY7 FAM106DP-201ENST00000586416 501 ntBASIC2.35□□□□□ -2.03
IFT140Q96RY7 AC097468.3-201ENST00000607956 456 ntBASIC2.35□□□□□ -2.03
IFT140Q96RY7 AC068944.2-201ENST00000610373 403 ntBASIC2.35□□□□□ -2.03
IFT140Q96RY7 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
IFT140Q96RY7 SNORA67.1-201ENST00000364749 141 ntBASIC2.34□□□□□ -2.03
IFT140Q96RY7 HSFY3P-201ENST00000444242 1191 ntBASIC2.34□□□□□ -2.03
IFT140Q96RY7 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.34□□□□□ -2.03
IFT140Q96RY7 snoU109.4-201ENST00000458953 143 ntBASIC2.34□□□□□ -2.03
IFT140Q96RY7 MTCYBP18-201ENST00000501056 747 ntBASIC2.34□□□□□ -2.03
IFT140Q96RY7 AC125611.2-201ENST00000551907 647 ntBASIC2.34□□□□□ -2.03
IFT140Q96RY7 HSPE1P3-201ENST00000559254 309 ntBASIC2.34□□□□□ -2.03
IFT140Q96RY7 AC121761.2-201ENST00000617300 689 ntBASIC2.34□□□□□ -2.03
IFT140Q96RY7 AC145207.9-201ENST00000623802 325 ntBASIC2.34□□□□□ -2.03
IFT140Q96RY7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.03
IFT140Q96RY7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
IFT140Q96RY7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.33□□□□□ -2.04
IFT140Q96RY7 RNU2-25P-201ENST00000411041 191 ntBASIC2.33□□□□□ -2.04
IFT140Q96RY7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.33□□□□□ -2.04
IFT140Q96RY7 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.33□□□□□ -2.04
IFT140Q96RY7 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.33□□□□□ -2.04
IFT140Q96RY7 OR5H4P-201ENST00000510851 923 ntBASIC2.33□□□□□ -2.04
IFT140Q96RY7 OR4R1P-201ENST00000529879 463 ntBASIC2.33□□□□□ -2.04
IFT140Q96RY7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.33□□□□□ -2.04
IFT140Q96RY7 AC023813.2-201ENST00000564321 469 ntBASIC2.33□□□□□ -2.04
IFT140Q96RY7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.33□□□□□ -2.04
IFT140Q96RY7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
IFT140Q96RY7 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.33□□□□□ -2.04
IFT140Q96RY7 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
IFT140Q96RY7 FABP5P3-201ENST00000437960 408 ntBASIC2.33□□□□□ -2.04
IFT140Q96RY7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.33□□□□□ -2.04
IFT140Q96RY7 RPS29P29-201ENST00000456396 171 ntBASIC2.33□□□□□ -2.04
IFT140Q96RY7 HMGN1P8-201ENST00000463578 288 ntBASIC2.33□□□□□ -2.04
IFT140Q96RY7 RPL21P103-201ENST00000479921 488 ntBASIC2.33□□□□□ -2.04
IFT140Q96RY7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.33□□□□□ -2.04
IFT140Q96RY7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
IFT140Q96RY7 LLPHP1-201ENST00000603571 367 ntBASIC2.33□□□□□ -2.04
IFT140Q96RY7 AC034236.3-201ENST00000605999 461 ntBASIC2.33□□□□□ -2.04
IFT140Q96RY7 AC083806.3-201ENST00000614016 455 ntBASIC2.33□□□□□ -2.04
IFT140Q96RY7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.33□□□□□ -2.04
IFT140Q96RY7 PABPC1P7-201ENST00000413177 1513 ntBASIC2.32□□□□□ -2.04
IFT140Q96RY7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
IFT140Q96RY7 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.32□□□□□ -2.04
IFT140Q96RY7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.32□□□□□ -2.04
IFT140Q96RY7 AC009901.1-201ENST00000506703 541 ntBASIC2.32□□□□□ -2.04
IFT140Q96RY7 AP001804.3-201ENST00000525146 880 ntBASIC2.32□□□□□ -2.04
IFT140Q96RY7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.32□□□□□ -2.04
IFT140Q96RY7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.31□□□□□ -2.04
IFT140Q96RY7 Y_RNA.374-201ENST00000365606 101 ntBASIC2.31□□□□□ -2.04
IFT140Q96RY7 DNAJC19P6-201ENST00000401853 280 ntBASIC2.31□□□□□ -2.04
IFT140Q96RY7 MIR548J-201ENST00000408833 112 ntBASIC2.31□□□□□ -2.04
IFT140Q96RY7 AC073264.1-201ENST00000411508 416 ntBASIC2.31□□□□□ -2.04
IFT140Q96RY7 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.31□□□□□ -2.04
IFT140Q96RY7 POLR2J4-204ENST00000418424 324 ntBASIC2.31□□□□□ -2.04
IFT140Q96RY7 HMGN2P38-201ENST00000423806 265 ntBASIC2.31□□□□□ -2.04
IFT140Q96RY7 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.31□□□□□ -2.04
IFT140Q96RY7 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.31□□□□□ -2.04
IFT140Q96RY7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.31□□□□□ -2.04
IFT140Q96RY7 HMGN2P16-201ENST00000456802 261 ntBASIC2.31□□□□□ -2.04
IFT140Q96RY7 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.31□□□□□ -2.04
IFT140Q96RY7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.31□□□□□ -2.04
IFT140Q96RY7 AC068135.2-201ENST00000569293 1028 ntBASIC2.31□□□□□ -2.04
IFT140Q96RY7 MIR7973-1-201ENST00000614683 76 ntBASIC2.31□□□□□ -2.04
IFT140Q96RY7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
IFT140Q96RY7 AP003072.4-201ENST00000624580 310 ntBASIC2.31□□□□□ -2.04
IFT140Q96RY7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
IFT140Q96RY7 MTCO1P4-201ENST00000520516 1409 ntBASIC2.3□□□□□ -2.04
IFT140Q96RY7 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.3□□□□□ -2.04
IFT140Q96RY7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
IFT140Q96RY7 SNORA40.6-201ENST00000391153 128 ntBASIC2.3□□□□□ -2.04
IFT140Q96RY7 CCNB2P1-201ENST00000399411 1150 ntBASIC2.3□□□□□ -2.04
IFT140Q96RY7 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.3□□□□□ -2.04
IFT140Q96RY7 HMGN2P19-201ENST00000425149 265 ntBASIC2.3□□□□□ -2.04
IFT140Q96RY7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.3□□□□□ -2.04
IFT140Q96RY7 MTND1P18-201ENST00000448191 573 ntBASIC2.3□□□□□ -2.04
IFT140Q96RY7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.3□□□□□ -2.04
IFT140Q96RY7 HMGN2P18-201ENST00000450680 270 ntBASIC2.3□□□□□ -2.04
IFT140Q96RY7 AC096992.1-201ENST00000459808 709 ntBASIC2.3□□□□□ -2.04
IFT140Q96RY7 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.3□□□□□ -2.04
IFT140Q96RY7 AC090515.1-201ENST00000465295 476 ntBASIC2.3□□□□□ -2.04
IFT140Q96RY7 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
IFT140Q96RY7 NPM1P52-201ENST00000518264 846 ntBASIC2.3□□□□□ -2.04
IFT140Q96RY7 SUB1P1-201ENST00000524415 382 ntBASIC2.3□□□□□ -2.04
IFT140Q96RY7 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.3□□□□□ -2.04
IFT140Q96RY7 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.3□□□□□ -2.04
IFT140Q96RY7 MIR6840-201ENST00000611937 71 ntBASIC2.3□□□□□ -2.04
IFT140Q96RY7 AC010809.3-201ENST00000621310 641 ntBASIC2.3□□□□□ -2.04
IFT140Q96RY7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.3□□□□□ -2.04
IFT140Q96RY7 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
IFT140Q96RY7 MIR153-1-201ENST00000384914 90 ntBASIC2.29□□□□□ -2.04
IFT140Q96RY7 MIR1304-201ENST00000408243 91 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms