Protein–RNA interactions for Protein: Q96Q05

TRAPPC9, Trafficking protein particle complex subunit 9, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9Q96Q05 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AC011979.2-201ENST00000527568 352 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 MIR3167-201ENST00000579623 85 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AC068790.2-201ENST00000602601 557 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AC091167.4-201ENST00000605079 184 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AL161734.1-201ENST00000609720 557 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AC087241.4-201ENST00000612441 480 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 SNHG22-203ENST00000617833 660 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AC099842.1-201ENST00000619919 596 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 RNU6-511P-201ENST00000363496 107 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 RNU6-1284P-201ENST00000363701 100 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 RNA5SP399-201ENST00000364003 117 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 DEFB109C-201ENST00000382575 264 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 DEFB109B-201ENST00000382656 264 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 SNORA20.2-201ENST00000383922 131 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 RNU6-259P-201ENST00000383999 107 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 MIR200C-201ENST00000384980 68 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 MIR1251-201ENST00000408552 70 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 ELOCP4-201ENST00000420090 333 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AC008850.1-201ENST00000427546 362 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 RPL31P35-201ENST00000431058 377 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 USP12PX-201ENST00000432383 1057 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 HMGN2P7-201ENST00000456186 273 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AL049714.1-201ENST00000466686 347 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AC010631.1-201ENST00000474150 156 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 RPS4XP13-201ENST00000483219 789 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AC105252.1-201ENST00000503089 286 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AC105914.1-201ENST00000511798 226 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 GMPSP1-201ENST00000514075 579 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 RNU6-840P-201ENST00000517275 65 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AC093331.1-201ENST00000521474 169 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 YPEL5P3-201ENST00000547227 352 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AC087883.1-201ENST00000551882 391 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AL391840.1-201ENST00000571144 367 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 MIR3921-201ENST00000577308 85 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 ZNF415P1-201ENST00000582279 1166 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AC146944.4-201ENST00000602697 718 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AP002826.1-201ENST00000608835 315 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 MIR6075-201ENST00000620782 95 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AL359740.1-201ENST00000624340 592 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 AL353746.1-201ENST00000566293 6881 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 ZNF826P-207ENST00000622273 1910 ntBASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.81□□□□□ -1.8
TRAPPC9Q96Q05 SDAD1P2-201ENST00000441308 2028 ntBASIC3.8□□□□□ -1.8
TRAPPC9Q96Q05 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRAPPC9Q96Q05 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.8□□□□□ -1.8
TRAPPC9Q96Q05 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRAPPC9Q96Q05 OR5J1P-201ENST00000313544 939 ntBASIC3.8□□□□□ -1.8
TRAPPC9Q96Q05 RNU1-39P-201ENST00000383897 165 ntBASIC3.8□□□□□ -1.8
TRAPPC9Q96Q05 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.8□□□□□ -1.8
TRAPPC9Q96Q05 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.8□□□□□ -1.8
TRAPPC9Q96Q05 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.8□□□□□ -1.8
TRAPPC9Q96Q05 HMGB1P12-201ENST00000438594 598 ntBASIC3.8□□□□□ -1.8
TRAPPC9Q96Q05 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.8□□□□□ -1.8
TRAPPC9Q96Q05 AC079448.1-201ENST00000449377 373 ntBASIC3.8□□□□□ -1.8
TRAPPC9Q96Q05 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.8□□□□□ -1.8
TRAPPC9Q96Q05 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.8□□□□□ -1.8
TRAPPC9Q96Q05 RPS27AP1-201ENST00000475545 471 ntBASIC3.8□□□□□ -1.8
TRAPPC9Q96Q05 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.8□□□□□ -1.8
TRAPPC9Q96Q05 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
TRAPPC9Q96Q05 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms