Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTCHD1Q96NR3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTCHD1Q96NR3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTCHD1Q96NR3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
PTCHD1Q96NR3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 SCN1A-220ENST00000641603 12506 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 Z73965.1-201ENST00000623412 2297 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 RNU6-1249P-201ENST00000363237 111 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 Y_RNA.463-201ENST00000384271 102 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 RPS4XP7-201ENST00000406274 780 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 MIR548F4-201ENST00000408515 105 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 RNU2-43P-201ENST00000410306 190 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 RNU6-1050P-201ENST00000410388 107 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 PPP1R11P2-201ENST00000423543 382 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 RPL7P37-201ENST00000425095 738 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 MTCYBP9-201ENST00000431021 303 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 NRBF2P3-201ENST00000432731 865 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 RPS17P8-201ENST00000434525 335 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 RPL29P29-201ENST00000448725 423 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 RPS5P7-201ENST00000456664 608 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 SNORA25.10-201ENST00000515926 124 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 RN7SKP276-201ENST00000516242 268 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 CYCSP27-201ENST00000527643 293 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 AL161713.1-201ENST00000555538 145 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 OR4H12P-201ENST00000556269 907 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 AC010653.1-201ENST00000571108 881 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 MIR3149-201ENST00000584629 83 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 7SK.7-201ENST00000603504 247 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 AC007485.1-201ENST00000616755 206 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 PNPT1P2-201ENST00000456768 2050 ntBASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTCHD1Q96NR3 EIF2AP4-201ENST00000424793 1781 ntBASIC4.53□□□□□ -1.69
PTCHD1Q96NR3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 MAPK10-349ENST00000641767 3661 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 ZNF807-201ENST00000328088 1707 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 Y_RNA.252-201ENST00000364556 101 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 Y_RNA.404-201ENST00000383978 102 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 RNA5SP87-201ENST00000384155 118 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 U3.30-201ENST00000391308 210 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 AL121871.1-201ENST00000443413 436 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 AC087884.1-201ENST00000469738 328 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 AC007686.1-201ENST00000488511 463 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 AC026801.1-201ENST00000497178 464 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 AC104136.1-201ENST00000512969 394 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 MTCO2P24-201ENST00000515611 426 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 Y_RNA.661-201ENST00000516003 99 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 Y_RNA.670-201ENST00000516255 105 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 RNU6-764P-201ENST00000516396 105 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 AC008694.2-201ENST00000517591 306 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 AC126177.3-201ENST00000551839 688 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 AC004817.2-201ENST00000561794 651 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 AC091042.1-201ENST00000579213 173 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 BNIP3P16-201ENST00000589779 534 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 AL391358.1-201ENST00000605342 190 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 AC018462.2-201ENST00000605375 395 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 AC015914.2-201ENST00000618167 288 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 MIR4275-201ENST00000636486 87 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 TLK1P1-201ENST00000456760 2440 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 AC090337.1-201ENST00000579651 2074 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 AC074029.4-201ENST00000624796 1859 ntBASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PTCHD1Q96NR3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.51□□□□□ -1.69
PTCHD1Q96NR3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PTCHD1Q96NR3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms