Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC022447.3-201ENST00000506865 495 ntBASIC1.31□□□□□ -2.2
CFAP54Q96N23 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.31□□□□□ -2.2
CFAP54Q96N23 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.31□□□□□ -2.2
CFAP54Q96N23 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CFAP54Q96N23 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CFAP54Q96N23 HSPE1P3-201ENST00000559254 309 ntBASIC1.31□□□□□ -2.2
CFAP54Q96N23 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC1.31□□□□□ -2.2
CFAP54Q96N23 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.31□□□□□ -2.2
CFAP54Q96N23 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.3□□□□□ -2.2
CFAP54Q96N23 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.3□□□□□ -2.2
CFAP54Q96N23 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CFAP54Q96N23 AC089999.1-201ENST00000460336 374 ntBASIC1.3□□□□□ -2.2
CFAP54Q96N23 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC1.3□□□□□ -2.2
CFAP54Q96N23 AC104115.2-201ENST00000523026 687 ntBASIC1.3□□□□□ -2.2
CFAP54Q96N23 AC012493.3-201ENST00000604494 112 ntBASIC1.3□□□□□ -2.2
CFAP54Q96N23 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
CFAP54Q96N23 RNF6P1-201ENST00000444889 1784 ntBASIC1.3□□□□□ -2.2
CFAP54Q96N23 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CFAP54Q96N23 HMGN2P38-201ENST00000423806 265 ntBASIC1.3□□□□□ -2.2
CFAP54Q96N23 AC006483.1-201ENST00000487308 313 ntBASIC1.3□□□□□ -2.2
CFAP54Q96N23 AC107918.3-201ENST00000533272 382 ntBASIC1.3□□□□□ -2.2
CFAP54Q96N23 AC131280.1-202ENST00000624067 4211 ntBASIC1.29□□□□□ -2.2
CFAP54Q96N23 RNU1-78P-201ENST00000391248 165 ntBASIC1.29□□□□□ -2.2
CFAP54Q96N23 HAUS1P1-201ENST00000505275 832 ntBASIC1.29□□□□□ -2.2
CFAP54Q96N23 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.29□□□□□ -2.2
CFAP54Q96N23 MTND5P9-201ENST00000503854 1755 ntBASIC1.29□□□□□ -2.2
CFAP54Q96N23 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.29□□□□□ -2.2
CFAP54Q96N23 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
CFAP54Q96N23 SNORA40.6-201ENST00000391153 128 ntBASIC1.29□□□□□ -2.2
CFAP54Q96N23 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.29□□□□□ -2.2
CFAP54Q96N23 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.29□□□□□ -2.2
CFAP54Q96N23 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.29□□□□□ -2.2
CFAP54Q96N23 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.29□□□□□ -2.2
CFAP54Q96N23 AC104307.1-201ENST00000616142 196 ntBASIC1.29□□□□□ -2.2
CFAP54Q96N23 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
CFAP54Q96N23 VTRNA1-1-201ENST00000363120 99 ntBASIC1.29□□□□□ -2.2
CFAP54Q96N23 Y_RNA.167-201ENST00000363735 109 ntBASIC1.29□□□□□ -2.2
CFAP54Q96N23 RNU2-22P-201ENST00000411266 212 ntBASIC1.29□□□□□ -2.2
CFAP54Q96N23 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.29□□□□□ -2.2
CFAP54Q96N23 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.29□□□□□ -2.2
CFAP54Q96N23 AP000648.3-201ENST00000623539 4507 ntBASIC1.29□□□□□ -2.2
CFAP54Q96N23 AL596276.1-201ENST00000434465 418 ntBASIC1.28□□□□□ -2.2
CFAP54Q96N23 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.28□□□□□ -2.2
CFAP54Q96N23 SNORD121B-201ENST00000458838 81 ntBASIC1.28□□□□□ -2.2
CFAP54Q96N23 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC1.28□□□□□ -2.2
CFAP54Q96N23 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.28□□□□□ -2.2
CFAP54Q96N23 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC1.28□□□□□ -2.2
CFAP54Q96N23 MIR338-201ENST00000636369 67 ntBASIC1.28□□□□□ -2.2
CFAP54Q96N23 U6.98-201ENST00000637157 84 ntBASIC1.28□□□□□ -2.2
CFAP54Q96N23 AC111188.2-201ENST00000529697 1387 ntBASIC1.28□□□□□ -2.2
CFAP54Q96N23 CYCSP33-201ENST00000414485 327 ntBASIC1.28□□□□□ -2.2
CFAP54Q96N23 AL109741.2-201ENST00000455561 343 ntBASIC1.28□□□□□ -2.2
CFAP54Q96N23 MIR2909-201ENST00000617113 69 ntBASIC1.28□□□□□ -2.2
CFAP54Q96N23 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CFAP54Q96N23 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.28□□□□□ -2.21
CFAP54Q96N23 SNORA18.2-201ENST00000383865 132 ntBASIC1.27□□□□□ -2.21
CFAP54Q96N23 uc_338.20-201ENST00000621563 178 ntBASIC1.27□□□□□ -2.21
CFAP54Q96N23 DUXAP9-208ENST00000622815 614 ntBASIC1.27□□□□□ -2.21
CFAP54Q96N23 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
CFAP54Q96N23 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.27□□□□□ -2.21
CFAP54Q96N23 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.27□□□□□ -2.21
CFAP54Q96N23 AC023790.1-201ENST00000482174 347 ntBASIC1.27□□□□□ -2.21
CFAP54Q96N23 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
CFAP54Q96N23 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.27□□□□□ -2.21
CFAP54Q96N23 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.27□□□□□ -2.21
CFAP54Q96N23 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1.27□□□□□ -2.21
CFAP54Q96N23 MTND4LP5-201ENST00000605152 292 ntBASIC1.27□□□□□ -2.21
CFAP54Q96N23 AC016769.3-201ENST00000396562 315 ntBASIC1.26□□□□□ -2.21
CFAP54Q96N23 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CFAP54Q96N23 AP001005.3-201ENST00000622049 129 ntBASIC1.26□□□□□ -2.21
CFAP54Q96N23 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CFAP54Q96N23 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
CFAP54Q96N23 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
CFAP54Q96N23 U8.1-201ENST00000362843 134 ntBASIC1.26□□□□□ -2.21
CFAP54Q96N23 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.26□□□□□ -2.21
CFAP54Q96N23 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.26□□□□□ -2.21
CFAP54Q96N23 AC090515.1-201ENST00000465295 476 ntBASIC1.26□□□□□ -2.21
CFAP54Q96N23 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC1.26□□□□□ -2.21
CFAP54Q96N23 HSPE1P4-201ENST00000550617 308 ntBASIC1.26□□□□□ -2.21
CFAP54Q96N23 AC012531.5-201ENST00000611375 151 ntBASIC1.26□□□□□ -2.21
CFAP54Q96N23 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
CFAP54Q96N23 MIR924-201ENST00000638017 53 ntBASIC1.26□□□□□ -2.21
CFAP54Q96N23 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.26□□□□□ -2.21
CFAP54Q96N23 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
CFAP54Q96N23 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CFAP54Q96N23 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.26□□□□□ -2.21
CFAP54Q96N23 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.26□□□□□ -2.21
CFAP54Q96N23 RNU4-60P-201ENST00000517239 135 ntBASIC1.26□□□□□ -2.21
CFAP54Q96N23 AC025755.1-201ENST00000521306 278 ntBASIC1.26□□□□□ -2.21
CFAP54Q96N23 AP003033.1-201ENST00000527244 415 ntBASIC1.26□□□□□ -2.21
CFAP54Q96N23 AP005435.4-201ENST00000529514 284 ntBASIC1.26□□□□□ -2.21
CFAP54Q96N23 AC010928.2-201ENST00000588017 287 ntBASIC1.26□□□□□ -2.21
CFAP54Q96N23 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.25□□□□□ -2.21
CFAP54Q96N23 AC096571.1-202ENST00000506634 735 ntBASIC1.25□□□□□ -2.21
CFAP54Q96N23 AC121758.2-201ENST00000553271 193 ntBASIC1.25□□□□□ -2.21
CFAP54Q96N23 DUXAP11-201ENST00000603858 526 ntBASIC1.25□□□□□ -2.21
CFAP54Q96N23 AC121761.2-201ENST00000617300 689 ntBASIC1.25□□□□□ -2.21
CFAP54Q96N23 RNA5SP489-201ENST00000410986 109 ntBASIC1.25□□□□□ -2.21
CFAP54Q96N23 RPL7P53-201ENST00000421245 739 ntBASIC1.25□□□□□ -2.21
CFAP54Q96N23 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms