Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 AC034105.3-201ENST00000565294 442 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 GLUD1P4-201ENST00000590914 418 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 AC091057.2-201ENST00000602594 792 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 AC131902.3-201ENST00000611767 581 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 MIR7106-201ENST00000612419 65 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 AC091046.2-201ENST00000620775 665 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 AC092435.3-201ENST00000565538 3654 ntBASIC3.09□□□□□ -1.91
ZNF560Q96MR9 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.09□□□□□ -1.91
ZNF560Q96MR9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
ZNF560Q96MR9 MIR514A1-201ENST00000385133 98 ntBASIC3.09□□□□□ -1.91
ZNF560Q96MR9 RNU6-754P-201ENST00000391166 107 ntBASIC3.09□□□□□ -1.91
ZNF560Q96MR9 MIR887-201ENST00000401258 79 ntBASIC3.09□□□□□ -1.91
ZNF560Q96MR9 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.09□□□□□ -1.91
ZNF560Q96MR9 AC083875.1-201ENST00000419509 405 ntBASIC3.09□□□□□ -1.91
ZNF560Q96MR9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.09□□□□□ -1.91
ZNF560Q96MR9 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.09□□□□□ -1.91
ZNF560Q96MR9 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ZNF560Q96MR9 GAPDHP27-201ENST00000447427 1020 ntBASIC3.09□□□□□ -1.91
ZNF560Q96MR9 RPL37P4-201ENST00000448908 268 ntBASIC3.09□□□□□ -1.91
ZNF560Q96MR9 AC093281.2-201ENST00000510153 597 ntBASIC3.09□□□□□ -1.91
ZNF560Q96MR9 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.09□□□□□ -1.91
ZNF560Q96MR9 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.09□□□□□ -1.91
ZNF560Q96MR9 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.09□□□□□ -1.91
ZNF560Q96MR9 SCARNA13-201ENST00000516672 275 ntBASIC3.09□□□□□ -1.91
ZNF560Q96MR9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ZNF560Q96MR9 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.09□□□□□ -1.91
ZNF560Q96MR9 MTCO2P15-201ENST00000532655 656 ntBASIC3.09□□□□□ -1.91
ZNF560Q96MR9 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.09□□□□□ -1.91
ZNF560Q96MR9 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.09□□□□□ -1.91
ZNF560Q96MR9 SETP2-201ENST00000553886 926 ntBASIC3.09□□□□□ -1.91
ZNF560Q96MR9 ACTR3BP3-201ENST00000565577 979 ntBASIC3.09□□□□□ -1.91
ZNF560Q96MR9 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.09□□□□□ -1.91
ZNF560Q96MR9 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.09□□□□□ -1.91
ZNF560Q96MR9 RNU6-88P-201ENST00000606801 100 ntBASIC3.09□□□□□ -1.91
ZNF560Q96MR9 AC013470.4-201ENST00000619978 986 ntBASIC3.09□□□□□ -1.91
ZNF560Q96MR9 AP000484.1-201ENST00000620067 1252 ntBASIC3.09□□□□□ -1.91
ZNF560Q96MR9 AL078595.3-201ENST00000623815 1166 ntBASIC3.09□□□□□ -1.91
ZNF560Q96MR9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
ZNF560Q96MR9 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.09□□□□□ -1.91
ZNF560Q96MR9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ZNF560Q96MR9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
ZNF560Q96MR9 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
ZNF560Q96MR9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.92
ZNF560Q96MR9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.09□□□□□ -1.92
ZNF560Q96MR9 AC091564.4-201ENST00000533934 2194 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 RNU6-799P-201ENST00000363567 107 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 RNU6-114P-201ENST00000384704 105 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 RPL7P10-201ENST00000417407 739 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AC013410.2-201ENST00000422627 201 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 UBE2V1P13-201ENST00000436983 439 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 RPL21P2-201ENST00000440049 481 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AC093156.1-201ENST00000440382 670 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 RPS24P13-201ENST00000442520 397 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AL135938.1-201ENST00000443141 297 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AL590639.1-201ENST00000456484 337 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AL031183.1-201ENST00000457667 207 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 RN7SL75P-201ENST00000461926 281 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AP001025.2-201ENST00000490908 477 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AC007536.1-201ENST00000533382 349 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AL157394.1-201ENST00000562983 1224 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AC079089.3-201ENST00000603094 673 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AL137843.1-201ENST00000605078 385 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AL158042.1-201ENST00000605338 460 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AC007349.4-201ENST00000608114 532 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AL603758.1-201ENST00000618654 241 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AL391262.2-201ENST00000622466 494 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AC009039.2-201ENST00000624524 529 ntBASIC3.08□□□□□ -1.92
ZNF560Q96MR9 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF560Q96MR9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms