Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC026585.1-201ENST00000619582 524 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 U7.8-201ENST00000619968 63 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 AC079684.1-201ENST00000621405 437 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 AL645937.1-201ENST00000641739 1652 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNX27Q96L92 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
SNX27Q96L92 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.12□□□□□ -1.75
SNX27Q96L92 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNX27Q96L92 AL138713.1-201ENST00000624026 2130 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
SNX27Q96L92 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNX27Q96L92 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SNX27Q96L92 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SNX27Q96L92 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNX27Q96L92 SNORA80A-201ENST00000363922 136 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 SNORD6-201ENST00000365444 73 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 RNU6-1074P-201ENST00000383995 104 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 RNU6-637P-201ENST00000384050 107 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 MIR887-201ENST00000401258 79 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX27Q96L92 Y_RNA.619-201ENST00000410951 90 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 AF274854.1-201ENST00000413236 615 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 SSXP9-201ENST00000417503 292 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 TOMM22P1-201ENST00000418578 312 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 BX842559.1-201ENST00000419615 532 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 AC019097.1-201ENST00000424783 735 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.11□□□□□ -1.75
SNX27Q96L92 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.11□□□□□ -1.75
SNX27Q96L92 TIMM9P1-201ENST00000436122 256 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SNX27Q96L92 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX27Q96L92 NANOGNBP1-201ENST00000448444 480 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.11□□□□□ -1.75
SNX27Q96L92 AC084198.1-201ENST00000477747 402 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 UBE2CP3-201ENST00000502715 450 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 AC010587.1-201ENST00000505809 469 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 SNORA31.20-201ENST00000517111 133 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX27Q96L92 MTCYBP41-201ENST00000528913 1123 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.11□□□□□ -1.75
SNX27Q96L92 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX27Q96L92 AC090877.1-201ENST00000561418 344 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.11□□□□□ -1.75
SNX27Q96L92 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.11□□□□□ -1.75
SNX27Q96L92 MIR5187-201ENST00000583479 76 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 SNORD84-203ENST00000584275 78 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 AC010928.3-201ENST00000587712 541 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 AL049634.3-201ENST00000604968 457 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 SNORA62.6-201ENST00000606322 83 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 AC004908.2-201ENST00000609090 574 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 AL365440.1-201ENST00000436135 2167 ntBASIC4.11□□□□□ -1.75
SNX27Q96L92 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
SNX27Q96L92 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
SNX27Q96L92 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
SNX27Q96L92 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.1□□□□□ -1.75
SNX27Q96L92 TNPO1P3-201ENST00000436471 2662 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 AC004925.1-201ENST00000624256 2706 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SNX27Q96L92 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SNX27Q96L92 MTND5P26-201ENST00000426018 1752 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 RNU5A-8P-201ENST00000364102 114 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SNX27Q96L92 SNORA48.8-201ENST00000391324 134 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 SOD2P1-201ENST00000396543 562 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 AC127391.1-201ENST00000411737 98 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 RPS15AP12-201ENST00000419498 388 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 AC097713.2-201ENST00000430199 356 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX27Q96L92 AC119618.1-201ENST00000434191 222 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.1□□□□□ -1.75
SNX27Q96L92 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SNX27Q96L92 SNORA71B-202ENST00000439232 272 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.1□□□□□ -1.75
SNX27Q96L92 AL121871.1-201ENST00000443413 436 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX27Q96L92 NPM1P49-201ENST00000448027 714 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 AC106707.2-201ENST00000484182 374 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 AC105252.1-201ENST00000503089 286 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX27Q96L92 NDUFB4P9-201ENST00000511646 388 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 RNA5SP208-201ENST00000516156 78 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 MTCO2P4-201ENST00000517968 247 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.1□□□□□ -1.75
SNX27Q96L92 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.1□□□□□ -1.75
SNX27Q96L92 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.1□□□□□ -1.75
SNX27Q96L92 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.1□□□□□ -1.75
SNX27Q96L92 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.1□□□□□ -1.75
SNX27Q96L92 AC012493.2-201ENST00000595083 291 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 AL021997.1-201ENST00000605757 193 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 AL161734.1-201ENST00000609720 557 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 AL133173.2-201ENST00000614270 90 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 AC007998.5-201ENST00000622938 237 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 AL732618.1-201ENST00000623251 301 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SNX27Q96L92 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.1□□□□□ -1.75
SNX27Q96L92 RPS4XP5-202ENST00000449995 1334 ntBASIC4.1□□□□□ -1.75
SNX27Q96L92 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SNX27Q96L92 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms