Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RPGRIP1Q96KN7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPGRIP1Q96KN7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPGRIP1Q96KN7 AC103988.1-201ENST00000566382 2177 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 AC062016.1-201ENST00000355719 319 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 RNU6-28P-201ENST00000362378 107 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 RNU6-83P-201ENST00000384568 112 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 MTCYBP38-201ENST00000417160 1123 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 SSXP9-201ENST00000417503 292 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 AL121890.1-201ENST00000435457 205 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 AC004866.2-201ENST00000438285 481 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 AC126389.1-201ENST00000477436 290 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 RPL7P18-201ENST00000478965 734 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 OR4K8P-201ENST00000578842 1048 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 AC138761.3-201ENST00000579993 334 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 AC004987.4-201ENST00000603383 338 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 AL022099.1-201ENST00000604551 712 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 AL158042.1-201ENST00000605338 460 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 AL627309.6-201ENST00000606857 840 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 AC009570.1-201ENST00000609599 745 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 AL020991.1-201ENST00000612314 373 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 AL357080.1-201ENST00000617394 239 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 AL445264.1-201ENST00000621719 171 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 AC068787.1-201ENST00000623908 691 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 MIR6733-201ENST00000635723 61 ntBASIC3.19□□□□□ -1.9
RPGRIP1Q96KN7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 GABRG2-229ENST00000641017 3628 ntBASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 AC005539.1-201ENST00000443768 1479 ntBASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 MIR135A2-201ENST00000384854 100 ntBASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 USP9YP33-201ENST00000412220 421 ntBASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 MTATP6P4-201ENST00000427725 675 ntBASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 USP9YP35-201ENST00000435696 412 ntBASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 RPL39P40-201ENST00000445481 146 ntBASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 BBIP1P1-201ENST00000602999 279 ntBASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 AC090115.4-201ENST00000609970 188 ntBASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 AC087241.4-201ENST00000612441 480 ntBASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 CRYM-AS1-204ENST00000637983 556 ntBASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 AC006927.4-201ENST00000639187 543 ntBASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 AC092447.7-201ENST00000422212 1621 ntBASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.18□□□□□ -1.9
RPGRIP1Q96KN7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 ZNF876P-202ENST00000398732 1485 ntBASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 MIR493-201ENST00000385254 89 ntBASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 AL136372.1-201ENST00000403060 228 ntBASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 RNU6-757P-201ENST00000410334 100 ntBASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 ZYG11AP1-201ENST00000430329 837 ntBASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 Z80107.1-201ENST00000436830 412 ntBASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 MTND5P14-201ENST00000441481 1267 ntBASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 EEF1E1P1-201ENST00000446998 430 ntBASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 AC002381.1-201ENST00000447049 280 ntBASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 AL513124.1-201ENST00000450410 614 ntBASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 MEMO1P3-201ENST00000459811 302 ntBASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 AC083906.5-201ENST00000503722 328 ntBASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 AC110760.3-202ENST00000515177 371 ntBASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 OR6C7P-201ENST00000547875 934 ntBASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 AC090615.1-201ENST00000577519 154 ntBASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 AL133507.1-201ENST00000605269 557 ntBASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 AC012443.1-201ENST00000605605 231 ntBASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RPGRIP1Q96KN7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms