Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 MTCO3P24-201ENST00000572729 782 ntBASIC2.91□□□□□ -1.94
USP47Q96K76 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.91□□□□□ -1.94
USP47Q96K76 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.91□□□□□ -1.94
USP47Q96K76 AP001542.2-201ENST00000593141 364 ntBASIC2.91□□□□□ -1.94
USP47Q96K76 AC008962.1-201ENST00000605729 304 ntBASIC2.91□□□□□ -1.94
USP47Q96K76 AP000238.1-201ENST00000608759 426 ntBASIC2.91□□□□□ -1.94
USP47Q96K76 API5P2-201ENST00000397055 1498 ntBASIC2.91□□□□□ -1.94
USP47Q96K76 MTND5P29-201ENST00000458676 1807 ntBASIC2.91□□□□□ -1.94
USP47Q96K76 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
USP47Q96K76 MIR217-201ENST00000384817 110 ntBASIC2.9□□□□□ -1.94
USP47Q96K76 MCTS2P-201ENST00000394552 546 ntBASIC2.9□□□□□ -1.94
USP47Q96K76 RNU2-72P-201ENST00000411175 163 ntBASIC2.9□□□□□ -1.94
USP47Q96K76 AL096701.2-201ENST00000416920 238 ntBASIC2.9□□□□□ -1.94
USP47Q96K76 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.9□□□□□ -1.94
USP47Q96K76 AL645638.1-201ENST00000440519 361 ntBASIC2.9□□□□□ -1.94
USP47Q96K76 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.9□□□□□ -1.94
USP47Q96K76 COX6CP18-201ENST00000448769 222 ntBASIC2.9□□□□□ -1.94
USP47Q96K76 SNORA31.26-201ENST00000517250 137 ntBASIC2.9□□□□□ -1.94
USP47Q96K76 RNU6-711P-201ENST00000517255 106 ntBASIC2.9□□□□□ -1.94
USP47Q96K76 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
USP47Q96K76 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.9□□□□□ -1.94
USP47Q96K76 ERHP1-201ENST00000523006 310 ntBASIC2.9□□□□□ -1.94
USP47Q96K76 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.9□□□□□ -1.94
USP47Q96K76 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.9□□□□□ -1.94
USP47Q96K76 AC106900.2-201ENST00000604994 317 ntBASIC2.9□□□□□ -1.94
USP47Q96K76 AC016727.1-205ENST00000605437 569 ntBASIC2.9□□□□□ -1.94
USP47Q96K76 AC092954.1-201ENST00000609121 445 ntBASIC2.9□□□□□ -1.94
USP47Q96K76 AP005137.2-201ENST00000609238 400 ntBASIC2.9□□□□□ -1.94
USP47Q96K76 AC090897.3-201ENST00000636973 1157 ntBASIC2.9□□□□□ -1.94
USP47Q96K76 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
USP47Q96K76 DBF4P1-201ENST00000412976 1892 ntBASIC2.9□□□□□ -1.95
USP47Q96K76 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
USP47Q96K76 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
USP47Q96K76 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.9□□□□□ -1.95
USP47Q96K76 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.89□□□□□ -1.95
USP47Q96K76 RNU6-492P-201ENST00000363035 104 ntBASIC2.89□□□□□ -1.95
USP47Q96K76 Y_RNA.110-201ENST00000363220 99 ntBASIC2.89□□□□□ -1.95
USP47Q96K76 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.89□□□□□ -1.95
USP47Q96K76 RNU6-468P-201ENST00000384003 109 ntBASIC2.89□□□□□ -1.95
USP47Q96K76 MTCO3P1-205ENST00000422088 832 ntBASIC2.89□□□□□ -1.95
USP47Q96K76 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.89□□□□□ -1.95
USP47Q96K76 SNRPEP4-201ENST00000435815 279 ntBASIC2.89□□□□□ -1.95
USP47Q96K76 USP9YP8-201ENST00000441913 500 ntBASIC2.89□□□□□ -1.95
USP47Q96K76 MTCO1P48-201ENST00000448024 1096 ntBASIC2.89□□□□□ -1.95
USP47Q96K76 snoU109.4-201ENST00000458953 143 ntBASIC2.89□□□□□ -1.95
USP47Q96K76 AC013828.1-201ENST00000481845 158 ntBASIC2.89□□□□□ -1.95
USP47Q96K76 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.89□□□□□ -1.95
USP47Q96K76 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.89□□□□□ -1.95
USP47Q96K76 MTND2P31-201ENST00000512602 616 ntBASIC2.89□□□□□ -1.95
USP47Q96K76 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.89□□□□□ -1.95
USP47Q96K76 RNU6-295P-201ENST00000516901 104 ntBASIC2.89□□□□□ -1.95
USP47Q96K76 SNORA48.10-201ENST00000516965 160 ntBASIC2.89□□□□□ -1.95
USP47Q96K76 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.89□□□□□ -1.95
USP47Q96K76 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.89□□□□□ -1.95
USP47Q96K76 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.89□□□□□ -1.95
USP47Q96K76 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.89□□□□□ -1.95
USP47Q96K76 OR11H5P-201ENST00000554039 926 ntBASIC2.89□□□□□ -1.95
USP47Q96K76 AC044913.1-201ENST00000557200 430 ntBASIC2.89□□□□□ -1.95
USP47Q96K76 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.89□□□□□ -1.95
USP47Q96K76 AC093875.1-201ENST00000623688 504 ntBASIC2.89□□□□□ -1.95
USP47Q96K76 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
USP47Q96K76 GDI2P1-201ENST00000429312 1336 ntBASIC2.89□□□□□ -1.95
USP47Q96K76 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
USP47Q96K76 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
USP47Q96K76 MIRLET7G-201ENST00000362280 84 ntBASIC2.88□□□□□ -1.95
USP47Q96K76 RNU6-1066P-201ENST00000363573 105 ntBASIC2.88□□□□□ -1.95
USP47Q96K76 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
USP47Q96K76 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
USP47Q96K76 AC092634.6-201ENST00000418558 192 ntBASIC2.88□□□□□ -1.95
USP47Q96K76 HSPE1P1-201ENST00000421494 318 ntBASIC2.88□□□□□ -1.95
USP47Q96K76 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.88□□□□□ -1.95
USP47Q96K76 RAC1P8-201ENST00000427086 527 ntBASIC2.88□□□□□ -1.95
USP47Q96K76 MTCYBP34-201ENST00000439552 670 ntBASIC2.88□□□□□ -1.95
USP47Q96K76 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.88□□□□□ -1.95
USP47Q96K76 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.88□□□□□ -1.95
USP47Q96K76 CBX3P3-201ENST00000508108 532 ntBASIC2.88□□□□□ -1.95
USP47Q96K76 AC117522.2-201ENST00000510049 657 ntBASIC2.88□□□□□ -1.95
USP47Q96K76 snoZ278.1-201ENST00000517059 112 ntBASIC2.88□□□□□ -1.95
USP47Q96K76 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.88□□□□□ -1.95
USP47Q96K76 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.88□□□□□ -1.95
USP47Q96K76 AC023632.1-201ENST00000518463 375 ntBASIC2.88□□□□□ -1.95
USP47Q96K76 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.88□□□□□ -1.95
USP47Q96K76 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.88□□□□□ -1.95
USP47Q96K76 PRELID2P1-201ENST00000552837 301 ntBASIC2.88□□□□□ -1.95
USP47Q96K76 AC103810.1-201ENST00000579873 453 ntBASIC2.88□□□□□ -1.95
USP47Q96K76 MIR4666A-201ENST00000580160 79 ntBASIC2.88□□□□□ -1.95
USP47Q96K76 AL133393.1-201ENST00000603277 287 ntBASIC2.88□□□□□ -1.95
USP47Q96K76 AC120053.1-201ENST00000607706 736 ntBASIC2.88□□□□□ -1.95
USP47Q96K76 AC103710.2-201ENST00000609912 942 ntBASIC2.88□□□□□ -1.95
USP47Q96K76 AC106028.5-201ENST00000610332 395 ntBASIC2.88□□□□□ -1.95
USP47Q96K76 YWHAEP7-203ENST00000622054 312 ntBASIC2.88□□□□□ -1.95
USP47Q96K76 AC080188.3-201ENST00000624842 748 ntBASIC2.88□□□□□ -1.95
USP47Q96K76 MFSD8-245ENST00000641743 948 ntBASIC2.88□□□□□ -1.95
USP47Q96K76 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.88□□□□□ -1.95
USP47Q96K76 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.88□□□□□ -1.95
USP47Q96K76 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
USP47Q96K76 AL161781.1-201ENST00000354277 403 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 Y_RNA.338-201ENST00000365320 114 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
USP47Q96K76 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms