Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.2□□□□□ -1.9
PDLIM5Q96HC4 AC007954.1-201ENST00000554198 494 ntBASIC3.2□□□□□ -1.9
PDLIM5Q96HC4 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.2□□□□□ -1.9
PDLIM5Q96HC4 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.2□□□□□ -1.9
PDLIM5Q96HC4 HMGB1P6-201ENST00000569046 646 ntBASIC3.2□□□□□ -1.9
PDLIM5Q96HC4 ROCK1P1-201ENST00000573767 549 ntBASIC3.2□□□□□ -1.9
PDLIM5Q96HC4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.2□□□□□ -1.9
PDLIM5Q96HC4 AL020997.2-201ENST00000602607 184 ntBASIC3.2□□□□□ -1.9
PDLIM5Q96HC4 AL596327.1-201ENST00000603629 213 ntBASIC3.2□□□□□ -1.9
PDLIM5Q96HC4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.2□□□□□ -1.9
PDLIM5Q96HC4 U1.23-201ENST00000610293 146 ntBASIC3.2□□□□□ -1.9
PDLIM5Q96HC4 AL157817.1-201ENST00000614264 790 ntBASIC3.2□□□□□ -1.9
PDLIM5Q96HC4 AL161629.2-201ENST00000615347 275 ntBASIC3.2□□□□□ -1.9
PDLIM5Q96HC4 RNU1-68P-201ENST00000615382 146 ntBASIC3.2□□□□□ -1.9
PDLIM5Q96HC4 U1.39-201ENST00000621562 146 ntBASIC3.2□□□□□ -1.9
PDLIM5Q96HC4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.2□□□□□ -1.9
PDLIM5Q96HC4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.2□□□□□ -1.9
PDLIM5Q96HC4 AC099063.3-201ENST00000642066 185 ntBASIC3.2□□□□□ -1.9
PDLIM5Q96HC4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PDLIM5Q96HC4 ZNF833P-201ENST00000424938 1494 ntBASIC3.2□□□□□ -1.9
PDLIM5Q96HC4 AC091564.4-201ENST00000533934 2194 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 RNU6-289P-201ENST00000364093 107 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 RNU6-253P-201ENST00000384730 105 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 MIR490-201ENST00000384865 128 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AC098826.1-201ENST00000433943 471 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 MTCYBP39-201ENST00000437562 491 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 TAF9P1-201ENST00000445421 515 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 EEF1E1P1-201ENST00000446998 430 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 MTND1P29-201ENST00000448112 647 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AC115115.1-201ENST00000449927 248 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 RPL23AP35-201ENST00000451906 501 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 TAF9P2-201ENST00000454958 515 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AC010099.1-201ENST00000455434 375 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 RPL31P3-201ENST00000458430 332 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 FAM133DP-201ENST00000464802 691 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 RN7SL293P-201ENST00000481765 281 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AC034222.1-201ENST00000494052 532 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 HIGD1AP1-201ENST00000550979 275 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AC034268.2-201ENST00000571784 482 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AC136618.2-201ENST00000575091 400 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 NBR2-204ENST00000587322 63 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AP001981.2-201ENST00000603241 418 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AC135507.1-201ENST00000607214 561 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AC013476.2-201ENST00000614456 459 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 Z69908.1-201ENST00000622603 247 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AC092192.1-201ENST00000633154 1018 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 OR5H6-203ENST00000642105 978 ntBASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.19□□□□□ -1.9
PDLIM5Q96HC4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 OR4G2P-202ENST00000641004 1759 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 RPL21P132-201ENST00000331267 462 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 RNU6-462P-201ENST00000362659 105 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 RNU6-223P-201ENST00000362830 107 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 RNU5E-8P-201ENST00000363502 116 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 Y_RNA.302-201ENST00000364997 102 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 SNORA36C-201ENST00000384289 132 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 RNU6-114P-201ENST00000384704 105 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 NPM1P11-201ENST00000417106 855 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 AC069157.1-201ENST00000421749 137 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 RPL21P133-201ENST00000443666 476 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 TPTE2P5-203ENST00000458118 728 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 RPS29P12-201ENST00000460178 152 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 MTND4LP3-201ENST00000468320 276 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 AC072039.1-201ENST00000477611 581 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 AC021678.1-201ENST00000505195 936 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 RNA5SP217-201ENST00000515959 91 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 RNA5SP380-201ENST00000517190 98 ntBASIC3.18□□□□□ -1.9
PDLIM5Q96HC4 RNA5SP291-201ENST00000517222 105 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms