Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.36□□□□□ -1.87
HDAC11Q96DB2 MIR4307-201ENST00000582802 84 ntBASIC3.36□□□□□ -1.87
HDAC11Q96DB2 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.36□□□□□ -1.87
HDAC11Q96DB2 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.36□□□□□ -1.87
HDAC11Q96DB2 AC112187.2-201ENST00000604345 283 ntBASIC3.36□□□□□ -1.87
HDAC11Q96DB2 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.36□□□□□ -1.87
HDAC11Q96DB2 AC004223.4-201ENST00000612426 332 ntBASIC3.36□□□□□ -1.87
HDAC11Q96DB2 AL157817.1-201ENST00000614264 790 ntBASIC3.36□□□□□ -1.87
HDAC11Q96DB2 AC079416.3-201ENST00000624479 549 ntBASIC3.36□□□□□ -1.87
HDAC11Q96DB2 AC091965.5-201ENST00000624785 342 ntBASIC3.36□□□□□ -1.87
HDAC11Q96DB2 MIR4275-201ENST00000636486 87 ntBASIC3.36□□□□□ -1.87
HDAC11Q96DB2 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HDAC11Q96DB2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
HDAC11Q96DB2 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HDAC11Q96DB2 OR4G2P-202ENST00000641004 1759 ntBASIC3.35□□□□□ -1.87
HDAC11Q96DB2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
HDAC11Q96DB2 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.35□□□□□ -1.87
HDAC11Q96DB2 RNU6-500P-201ENST00000362349 107 ntBASIC3.35□□□□□ -1.87
HDAC11Q96DB2 MIR514A1-201ENST00000385133 98 ntBASIC3.35□□□□□ -1.87
HDAC11Q96DB2 U8.14-201ENST00000390843 143 ntBASIC3.35□□□□□ -1.87
HDAC11Q96DB2 RPS4XP3-201ENST00000398541 413 ntBASIC3.35□□□□□ -1.87
HDAC11Q96DB2 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HDAC11Q96DB2 RNA5SP107-201ENST00000411358 122 ntBASIC3.35□□□□□ -1.87
HDAC11Q96DB2 HMGN1P24-201ENST00000412282 298 ntBASIC3.35□□□□□ -1.87
HDAC11Q96DB2 HMGB3P23-201ENST00000414981 585 ntBASIC3.35□□□□□ -1.87
HDAC11Q96DB2 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC11Q96DB2 RPL7L1P10-201ENST00000427790 463 ntBASIC3.35□□□□□ -1.87
HDAC11Q96DB2 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.35□□□□□ -1.87
HDAC11Q96DB2 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC11Q96DB2 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC11Q96DB2 MTND2P24-201ENST00000453434 806 ntBASIC3.35□□□□□ -1.87
HDAC11Q96DB2 SCARNA20.6-201ENST00000517251 106 ntBASIC3.35□□□□□ -1.87
HDAC11Q96DB2 AC104027.1-201ENST00000521887 300 ntBASIC3.35□□□□□ -1.87
HDAC11Q96DB2 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.35□□□□□ -1.87
HDAC11Q96DB2 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC11Q96DB2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC11Q96DB2 AC090616.2-202ENST00000584248 222 ntBASIC3.35□□□□□ -1.87
HDAC11Q96DB2 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.35□□□□□ -1.87
HDAC11Q96DB2 NIFKP6-201ENST00000598115 845 ntBASIC3.35□□□□□ -1.87
HDAC11Q96DB2 AC068313.1-201ENST00000604028 1008 ntBASIC3.35□□□□□ -1.87
HDAC11Q96DB2 PRELID3BP8-201ENST00000604148 295 ntBASIC3.35□□□□□ -1.87
HDAC11Q96DB2 AL360219.1-201ENST00000610230 366 ntBASIC3.35□□□□□ -1.87
HDAC11Q96DB2 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.35□□□□□ -1.87
HDAC11Q96DB2 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.35□□□□□ -1.87
HDAC11Q96DB2 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.35□□□□□ -1.87
HDAC11Q96DB2 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HDAC11Q96DB2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
HDAC11Q96DB2 FAM35CP-201ENST00000554755 2470 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HDAC11Q96DB2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
HDAC11Q96DB2 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.34□□□□□ -1.87
HDAC11Q96DB2 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 RNU1-39P-201ENST00000383897 165 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 RNU6-1197P-201ENST00000391183 107 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 SAR1AP2-201ENST00000392696 594 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 CCNG1P1-201ENST00000406783 885 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 UBE2FP1-201ENST00000416536 447 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 MTND4P20-201ENST00000424125 869 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.34□□□□□ -1.87
HDAC11Q96DB2 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.34□□□□□ -1.87
HDAC11Q96DB2 AC097713.2-201ENST00000430199 356 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 AC092573.2-201ENST00000434546 243 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 LARP1BP3-201ENST00000437229 869 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 FTH1P1-201ENST00000437933 532 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 HIGD1AP11-201ENST00000438361 280 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.34□□□□□ -1.87
HDAC11Q96DB2 AC068587.2-201ENST00000478386 781 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.34□□□□□ -1.87
HDAC11Q96DB2 AC098862.1-201ENST00000504991 413 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.34□□□□□ -1.87
HDAC11Q96DB2 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.34□□□□□ -1.87
HDAC11Q96DB2 DUXAP5-201ENST00000529668 529 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.34□□□□□ -1.87
HDAC11Q96DB2 AC027807.1-201ENST00000559921 996 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 AC145350.1-201ENST00000567426 208 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.34□□□□□ -1.87
HDAC11Q96DB2 AC106782.4-201ENST00000568264 210 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 MTCYBP22-201ENST00000603788 447 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 AC135507.2-201ENST00000612443 309 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 AC090132.2-201ENST00000615881 347 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.34□□□□□ -1.87
HDAC11Q96DB2 AC012150.2-201ENST00000621300 544 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 AP000676.3-201ENST00000623299 569 ntBASIC3.34□□□□□ -1.87
HDAC11Q96DB2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HDAC11Q96DB2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
HDAC11Q96DB2 AL138713.1-201ENST00000624026 2130 ntBASIC3.34□□□□□ -1.88
HDAC11Q96DB2 AC103988.1-201ENST00000566382 2177 ntBASIC3.34□□□□□ -1.88
HDAC11Q96DB2 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
HDAC11Q96DB2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HDAC11Q96DB2 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HDAC11Q96DB2 Y_RNA.97-201ENST00000363094 102 ntBASIC3.33□□□□□ -1.88
HDAC11Q96DB2 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
HDAC11Q96DB2 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.33□□□□□ -1.88
HDAC11Q96DB2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.33□□□□□ -1.88
HDAC11Q96DB2 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.33□□□□□ -1.88
HDAC11Q96DB2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.33□□□□□ -1.88
HDAC11Q96DB2 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HDAC11Q96DB2 AL512649.1-201ENST00000428997 581 ntBASIC3.33□□□□□ -1.88
HDAC11Q96DB2 AL356867.1-201ENST00000429623 299 ntBASIC3.33□□□□□ -1.88
HDAC11Q96DB2 RPL7P34-201ENST00000433316 712 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms