Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 OR4K11P-201ENST00000431829 904 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 FAM103A2P-201ENST00000444122 354 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 AL592447.1-201ENST00000447592 540 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 LINC00888-204ENST00000487386 421 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 RN7SL633P-201ENST00000488974 297 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 RPL30P5-201ENST00000494923 336 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 AC111000.2-201ENST00000507775 550 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 MTND5P4-201ENST00000514978 288 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 SCARNA15.2-201ENST00000516409 127 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 ELOCP32-201ENST00000548625 324 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 AC011260.1-201ENST00000578420 472 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 AC006504.3-201ENST00000586818 523 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 AC023043.3-201ENST00000593113 385 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 AC004067.1-201ENST00000608733 700 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 AL355816.2-201ENST00000610049 647 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 AC090132.2-201ENST00000615881 347 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 AC002076.2-201ENST00000617362 122 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 MIR6076-201ENST00000617521 113 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 AL356863.1-201ENST00000623378 1080 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 AC017037.3-201ENST00000625016 472 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 DDX10P1-201ENST00000448545 1933 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 MIR181B1-201ENST00000385240 110 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 MIR493-201ENST00000385254 89 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 BX323014.1-201ENST00000412876 237 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 HSFY4P-201ENST00000415994 1181 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 AL356867.1-201ENST00000429623 299 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 LARP1BP3-201ENST00000437229 869 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 AC122718.1-201ENST00000439448 744 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 MTND5P2-201ENST00000442927 1142 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 AL590664.1-201ENST00000448065 339 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 RPL21P41-201ENST00000459863 264 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 AC026403.1-201ENST00000518938 295 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 AP001804.3-201ENST00000525146 880 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 LRRC34P1-201ENST00000542742 915 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 HIGD1AP1-201ENST00000550979 275 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 AL606834.2-201ENST00000602954 668 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 AP000403.1-201ENST00000603349 851 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 Z99289.3-201ENST00000605586 594 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 U3.45-201ENST00000607547 219 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 AC004223.4-201ENST00000612426 332 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 AC140725.3-201ENST00000616193 880 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 AL603758.1-201ENST00000618654 241 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 AP000676.3-201ENST00000623299 569 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 AP003122.6-201ENST00000623831 495 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 AC091965.5-201ENST00000624785 342 ntBASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.43□□□□□ -2.02
RPUSD4Q96CM3 CCT4P2-201ENST00000233836 1548 ntBASIC2.42□□□□□ -2.02
RPUSD4Q96CM3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RPUSD4Q96CM3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.42□□□□□ -2.02
RPUSD4Q96CM3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
RPUSD4Q96CM3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
RPUSD4Q96CM3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
RPUSD4Q96CM3 RNU6-253P-201ENST00000384730 105 ntBASIC2.42□□□□□ -2.02
RPUSD4Q96CM3 TAS2R15P-201ENST00000390674 928 ntBASIC2.42□□□□□ -2.02
RPUSD4Q96CM3 RPS4XP3-201ENST00000398541 413 ntBASIC2.42□□□□□ -2.02
RPUSD4Q96CM3 FO393413.1-201ENST00000402892 195 ntBASIC2.42□□□□□ -2.02
RPUSD4Q96CM3 RN7SKP220-201ENST00000410611 288 ntBASIC2.42□□□□□ -2.02
RPUSD4Q96CM3 RNU6-516P-201ENST00000411381 104 ntBASIC2.42□□□□□ -2.02
RPUSD4Q96CM3 AL359704.1-201ENST00000411586 781 ntBASIC2.42□□□□□ -2.02
RPUSD4Q96CM3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.42□□□□□ -2.02
RPUSD4Q96CM3 BX682237.1-201ENST00000415016 335 ntBASIC2.42□□□□□ -2.02
RPUSD4Q96CM3 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.42□□□□□ -2.02
RPUSD4Q96CM3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.42□□□□□ -2.02
RPUSD4Q96CM3 TAAR7P-201ENST00000436141 242 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms