Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 AL079305.1-201ENST00000623159 3008 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.63□□□□□ -1.83
SMARCE1Q969G3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMARCE1Q969G3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.63□□□□□ -1.83
SMARCE1Q969G3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SMARCE1Q969G3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 SNORD115.1-201ENST00000391109 76 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 SNORA48.8-201ENST00000391324 134 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 Y_RNA.608-201ENST00000410647 95 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 RN7SKP142-201ENST00000411236 328 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 BX323014.1-201ENST00000412876 237 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 SDCBPP3-201ENST00000419629 891 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 MTCO2P16-201ENST00000436962 677 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 HMGB1P12-201ENST00000438594 598 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 RPL22P17-201ENST00000438729 315 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC122718.1-201ENST00000439448 744 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC009961.3-201ENST00000449832 765 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC112204.1-201ENST00000502591 103 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SMARCE1Q969G3 VN1R104P-201ENST00000505115 1009 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 MTCO2P32-201ENST00000514865 403 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 Y_RNA.695-201ENST00000516715 107 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 RNA5SP468-201ENST00000516782 93 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 RNU6-201P-201ENST00000517100 61 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC026403.1-201ENST00000518938 295 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC022616.6-201ENST00000520479 119 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AL133153.1-201ENST00000557756 303 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.63□□□□□ -1.83
SMARCE1Q969G3 MIR3922-201ENST00000585192 84 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AP001029.3-201ENST00000588063 596 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC068790.3-201ENST00000602988 553 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC112191.3-201ENST00000604371 277 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC106900.2-201ENST00000604994 317 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC068276.1-201ENST00000605793 379 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC138749.5-201ENST00000611461 208 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC025594.3-201ENST00000613068 790 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AL157817.1-201ENST00000614264 790 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC116165.2-201ENST00000616705 206 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC092140.2-201ENST00000618027 521 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC048344.4-201ENST00000619744 527 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC039056.2-201ENST00000622261 511 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC093831.2-201ENST00000624393 3427 ntBASIC3.63□□□□□ -1.83
SMARCE1Q969G3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
SMARCE1Q969G3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.63□□□□□ -1.83
SMARCE1Q969G3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SMARCE1Q969G3 AC116096.1-201ENST00000566804 2314 ntBASIC3.62□□□□□ -1.83
SMARCE1Q969G3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 RNU6-50P-201ENST00000362356 103 ntBASIC3.62□□□□□ -1.83
SMARCE1Q969G3 Y_RNA.77-201ENST00000362962 107 ntBASIC3.62□□□□□ -1.83
SMARCE1Q969G3 RNY3P10-201ENST00000384764 102 ntBASIC3.62□□□□□ -1.83
SMARCE1Q969G3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.62□□□□□ -1.83
SMARCE1Q969G3 RPS29P4-201ENST00000414733 161 ntBASIC3.62□□□□□ -1.83
SMARCE1Q969G3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 AL353777.1-201ENST00000425552 326 ntBASIC3.62□□□□□ -1.83
SMARCE1Q969G3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 RPL31P3-201ENST00000458430 332 ntBASIC3.62□□□□□ -1.83
SMARCE1Q969G3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 RPL21P13-201ENST00000488305 481 ntBASIC3.62□□□□□ -1.83
SMARCE1Q969G3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 AC010265.1-201ENST00000513509 211 ntBASIC3.62□□□□□ -1.83
SMARCE1Q969G3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 COX6CP3-201ENST00000580869 223 ntBASIC3.62□□□□□ -1.83
SMARCE1Q969G3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 AL020997.2-201ENST00000602607 184 ntBASIC3.62□□□□□ -1.83
SMARCE1Q969G3 AC080013.6-201ENST00000606185 215 ntBASIC3.62□□□□□ -1.83
SMARCE1Q969G3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 AC007038.2-201ENST00000608095 740 ntBASIC3.62□□□□□ -1.83
SMARCE1Q969G3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.62□□□□□ -1.83
SMARCE1Q969G3 AC099654.13-201ENST00000639774 207 ntBASIC3.62□□□□□ -1.83
SMARCE1Q969G3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
SMARCE1Q969G3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms