Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC098614.2-201ENST00000426040 255 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC244035.1-201ENST00000430042 390 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 SETP8-201ENST00000435341 628 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 AL354941.1-201ENST00000438600 464 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.02□□□□□ -1.93
PTP4A1Q93096 MTCYBP3-201ENST00000445588 1137 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC020550.1-201ENST00000447385 163 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC091564.1-201ENST00000464563 479 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.02□□□□□ -1.93
PTP4A1Q93096 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC022634.1-201ENST00000520765 532 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC103843.2-201ENST00000530523 682 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC007536.1-201ENST00000533382 349 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.02□□□□□ -1.93
PTP4A1Q93096 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC007115.1-201ENST00000546853 234 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC123904.3-201ENST00000547218 814 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC128657.1-201ENST00000549459 145 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.02□□□□□ -1.93
PTP4A1Q93096 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.02□□□□□ -1.93
PTP4A1Q93096 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC078899.3-201ENST00000599065 212 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC136601.2-201ENST00000604356 474 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC025588.2-201ENST00000604851 466 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC091965.4-201ENST00000607691 587 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.02□□□□□ -1.93
PTP4A1Q93096 AL607023.1-201ENST00000620045 248 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC039056.2-201ENST00000622261 511 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 AC012442.3-202ENST00000636742 206 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PTP4A1Q93096 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
PTP4A1Q93096 CCT4P2-201ENST00000233836 1548 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 CR383658.2-201ENST00000547576 1525 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.02□□□□□ -1.93
PTP4A1Q93096 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.01□□□□□ -1.93
PTP4A1Q93096 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PTP4A1Q93096 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.01□□□□□ -1.93
PTP4A1Q93096 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.01□□□□□ -1.93
PTP4A1Q93096 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
PTP4A1Q93096 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
PTP4A1Q93096 SNORD56.5-201ENST00000364281 72 ntBASIC3.01□□□□□ -1.93
PTP4A1Q93096 RNU6-769P-201ENST00000384407 104 ntBASIC3.01□□□□□ -1.93
PTP4A1Q93096 RN7SKP111-201ENST00000410349 271 ntBASIC3.01□□□□□ -1.93
PTP4A1Q93096 RPS24P7-201ENST00000416921 246 ntBASIC3.01□□□□□ -1.93
PTP4A1Q93096 RPL7P10-201ENST00000417407 739 ntBASIC3.01□□□□□ -1.93
PTP4A1Q93096 AC013410.2-201ENST00000422627 201 ntBASIC3.01□□□□□ -1.93
PTP4A1Q93096 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.01□□□□□ -1.93
PTP4A1Q93096 AC073063.1-201ENST00000434352 607 ntBASIC3.01□□□□□ -1.93
PTP4A1Q93096 AC244505.4-201ENST00000434905 287 ntBASIC3.01□□□□□ -1.93
PTP4A1Q93096 YWHAZP7-201ENST00000436906 631 ntBASIC3.01□□□□□ -1.93
PTP4A1Q93096 SSXP5-201ENST00000443473 287 ntBASIC3.01□□□□□ -1.93
PTP4A1Q93096 RPL7P36-201ENST00000444633 681 ntBASIC3.01□□□□□ -1.93
PTP4A1Q93096 RPL21P23-201ENST00000446654 460 ntBASIC3.01□□□□□ -1.93
PTP4A1Q93096 AL606517.1-201ENST00000446914 387 ntBASIC3.01□□□□□ -1.93
PTP4A1Q93096 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.01□□□□□ -1.93
PTP4A1Q93096 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.01□□□□□ -1.93
PTP4A1Q93096 AC010631.1-201ENST00000474150 156 ntBASIC3.01□□□□□ -1.93
PTP4A1Q93096 AC113155.1-201ENST00000511141 769 ntBASIC3.01□□□□□ -1.93
PTP4A1Q93096 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
PTP4A1Q93096 AC026403.1-201ENST00000518938 295 ntBASIC3.01□□□□□ -1.93
PTP4A1Q93096 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.01□□□□□ -1.93
PTP4A1Q93096 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.01□□□□□ -1.93
PTP4A1Q93096 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.01□□□□□ -1.93
PTP4A1Q93096 AC021171.1-201ENST00000603137 706 ntBASIC3.01□□□□□ -1.93
PTP4A1Q93096 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.01□□□□□ -1.93
PTP4A1Q93096 AC092106.3-201ENST00000611308 722 ntBASIC3.01□□□□□ -1.93
PTP4A1Q93096 AC090970.3-201ENST00000612566 866 ntBASIC3.01□□□□□ -1.93
PTP4A1Q93096 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
PTP4A1Q93096 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
PTP4A1Q93096 CR848007.1-201ENST00000442354 1699 ntBASIC3.01□□□□□ -1.93
PTP4A1Q93096 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
PTP4A1Q93096 AL356274.2-201ENST00000624379 3752 ntBASIC3.01□□□□□ -1.93
PTP4A1Q93096 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
PTP4A1Q93096 MTND5P29-201ENST00000458676 1807 ntBASIC3□□□□□ -1.93
PTP4A1Q93096 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3□□□□□ -1.93
PTP4A1Q93096 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3□□□□□ -1.93
PTP4A1Q93096 RNU6-433P-201ENST00000363216 104 ntBASIC3□□□□□ -1.93
PTP4A1Q93096 RNU5A-8P-201ENST00000364102 114 ntBASIC3□□□□□ -1.93
PTP4A1Q93096 Y_RNA.302-201ENST00000364997 102 ntBASIC3□□□□□ -1.93
PTP4A1Q93096 MIR887-201ENST00000401258 79 ntBASIC3□□□□□ -1.93
PTP4A1Q93096 RNA5SP344-201ENST00000411081 104 ntBASIC3□□□□□ -1.93
PTP4A1Q93096 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3□□□□□ -1.93
PTP4A1Q93096 RPL22P18-201ENST00000417197 377 ntBASIC3□□□□□ -1.93
PTP4A1Q93096 AC009414.1-201ENST00000427200 443 ntBASIC3□□□□□ -1.93
PTP4A1Q93096 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3□□□□□ -1.93
PTP4A1Q93096 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3□□□□□ -1.93
PTP4A1Q93096 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3□□□□□ -1.93
PTP4A1Q93096 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3□□□□□ -1.93
PTP4A1Q93096 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3□□□□□ -1.93
PTP4A1Q93096 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3□□□□□ -1.93
PTP4A1Q93096 MRPS17P3-201ENST00000465453 385 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms