Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 AL662791.1-201ENST00000441992 928 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 AC093392.2-201ENST00000450682 337 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 AC108860.1-201ENST00000484521 383 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 AC139783.2-201ENST00000504847 1145 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 SNORA74D-201ENST00000516404 141 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 RNU6-506P-201ENST00000516553 94 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 AC090572.1-201ENST00000519251 160 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 ERHP1-201ENST00000523006 310 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 OR5B10P-201ENST00000532869 642 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 AC128657.1-201ENST00000549459 145 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 MIR3690-201ENST00000580266 75 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 MIR3200-201ENST00000580767 85 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 AF038458.1-201ENST00000588406 262 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 AL136363.1-201ENST00000605349 337 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 SNHG22-203ENST00000617833 660 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 AC091905.1-201ENST00000624400 311 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 CR848007.1-201ENST00000442354 1699 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 AC027514.1-201ENST00000588561 1603 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 AC092326.2-201ENST00000624772 1561 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 AC116096.1-201ENST00000566804 2314 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 SNORD56.2-201ENST00000363242 71 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 SNORA36C-201ENST00000384289 132 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 AC110754.1-201ENST00000399740 601 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 AL603766.1-201ENST00000407763 664 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 RNU6-648P-201ENST00000410190 107 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 ATP5A1P2-201ENST00000412323 255 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 MTND3P21-201ENST00000433774 331 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 GAPDHP27-201ENST00000447427 1020 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 AC006480.1-201ENST00000449887 378 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 AC140076.1-201ENST00000449897 361 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 SNRPGP5-201ENST00000456003 220 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 AC010631.1-201ENST00000474150 156 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 SNORA31.8-201ENST00000516327 108 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 FAM60DP-201ENST00000524174 632 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 OR4H12P-201ENST00000556269 907 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 AC105224.1-201ENST00000587055 421 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 AP003465.2-201ENST00000602571 373 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 AL160281.1-201ENST00000605307 311 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 AC004825.2-201ENST00000616634 455 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 AL158209.2-201ENST00000619266 216 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 MIR7975-201ENST00000619350 68 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 AC124864.2-201ENST00000624736 186 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 AC068137.3-201ENST00000639191 341 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 AC073869.6-201ENST00000640656 341 ntBASIC3.79□□□□□ -1.8
HMGB4Q8WW32 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HMGB4Q8WW32 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 AC012020.1-201ENST00000624541 1728 ntBASIC3.78□□□□□ -1.8
HMGB4Q8WW32 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 RNU6-1284P-201ENST00000363701 100 ntBASIC3.78□□□□□ -1.8
HMGB4Q8WW32 AL359634.1-202ENST00000404721 284 ntBASIC3.78□□□□□ -1.8
HMGB4Q8WW32 TXNP7-201ENST00000406296 293 ntBASIC3.78□□□□□ -1.8
HMGB4Q8WW32 RNA5SP306-201ENST00000411087 107 ntBASIC3.78□□□□□ -1.8
HMGB4Q8WW32 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.78□□□□□ -1.8
HMGB4Q8WW32 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 AP000907.1-201ENST00000428428 510 ntBASIC3.78□□□□□ -1.8
HMGB4Q8WW32 FCF1P1-201ENST00000432690 571 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms