Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RNU6-984P-201ENST00000363236 109 ntBASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 RN7SKP44-201ENST00000363602 316 ntBASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 SNORD3H-201ENST00000384486 214 ntBASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 AL358232.1-201ENST00000448030 501 ntBASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 AL162388.1-201ENST00000450912 352 ntBASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 RNU7-152P-201ENST00000458982 64 ntBASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 RPS27P23-201ENST00000487608 251 ntBASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 HMGB3P15-201ENST00000507326 574 ntBASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 MTCO2P24-201ENST00000515611 426 ntBASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 RNU6-150P-201ENST00000516237 95 ntBASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 AC027309.2-201ENST00000520566 192 ntBASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 AL359999.1-201ENST00000604513 294 ntBASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 CTHRC1P1-201ENST00000605383 469 ntBASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 AC092807.2-201ENST00000609367 243 ntBASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
SH3RF3Q8TEJ3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 SNRPEP3-201ENST00000338402 276 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 RNA5SP52-201ENST00000362448 134 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 MIR200C-201ENST00000384980 68 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 RNU6-308P-201ENST00000390957 107 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 MIR1305-201ENST00000408300 86 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 RN7SKP266-201ENST00000410232 287 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 AC009161.1-201ENST00000417306 376 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 AL591419.1-201ENST00000427423 339 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 RPS3AP52-201ENST00000435639 297 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 AC092809.1-201ENST00000441469 474 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 CACYBPP2-201ENST00000453625 678 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 AC097493.1-201ENST00000463958 372 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 AC010655.3-201ENST00000478818 450 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 AC106872.3-201ENST00000495104 446 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 RNU1-95P-201ENST00000516357 160 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 RNU1-128P-201ENST00000516704 160 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 SNORD60.2-201ENST00000516883 86 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 RN7SKP256-201ENST00000517201 314 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 SUB1P1-201ENST00000524415 382 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 AP003122.3-201ENST00000526316 255 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 AL163153.1-201ENST00000554223 283 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 AC026464.5-201ENST00000562497 722 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 DPPA3P3-201ENST00000603842 430 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 AC010591.1-201ENST00000603941 649 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 AC084781.2-201ENST00000615568 161 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 LINC00901.1-201ENST00000617252 152 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 MIR6864-201ENST00000617935 70 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 uc_338.22-201ENST00000622722 187 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 RIOK3P1-201ENST00000418778 1528 ntBASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SH3RF3Q8TEJ3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SH3RF3Q8TEJ3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SH3RF3Q8TEJ3 XPOTP1-201ENST00000443317 2398 ntBASIC4.6□□□□□ -1.67
SH3RF3Q8TEJ3 AL512646.1-201ENST00000269395 1077 ntBASIC4.6□□□□□ -1.67
SH3RF3Q8TEJ3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.6□□□□□ -1.67
SH3RF3Q8TEJ3 MIR199A2-201ENST00000385289 110 ntBASIC4.6□□□□□ -1.67
SH3RF3Q8TEJ3 RNU4-14P-201ENST00000410858 122 ntBASIC4.6□□□□□ -1.67
SH3RF3Q8TEJ3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.6□□□□□ -1.67
SH3RF3Q8TEJ3 MTCO2P27-201ENST00000420740 428 ntBASIC4.6□□□□□ -1.67
SH3RF3Q8TEJ3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.6□□□□□ -1.67
SH3RF3Q8TEJ3 AL451062.2-201ENST00000427515 271 ntBASIC4.6□□□□□ -1.67
SH3RF3Q8TEJ3 NANOGP6-201ENST00000429190 847 ntBASIC4.6□□□□□ -1.67
SH3RF3Q8TEJ3 RPL7P4-203ENST00000430239 730 ntBASIC4.6□□□□□ -1.67
SH3RF3Q8TEJ3 RSU1P2-202ENST00000437884 485 ntBASIC4.6□□□□□ -1.67
SH3RF3Q8TEJ3 AC069285.2-201ENST00000440210 275 ntBASIC4.6□□□□□ -1.67
SH3RF3Q8TEJ3 RPL32P28-201ENST00000443577 397 ntBASIC4.6□□□□□ -1.67
SH3RF3Q8TEJ3 RPS17P13-201ENST00000448974 407 ntBASIC4.6□□□□□ -1.67
SH3RF3Q8TEJ3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms