Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 RABEPKP1-201ENST00000440529 1026 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AC099563.1-201ENST00000456086 418 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 RPS4XP13-201ENST00000483219 789 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 NDUFB4P2-201ENST00000509515 391 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 RN7SKP83-201ENST00000516512 178 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 SNORA70.18-201ENST00000516696 98 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 SNORA18.6-201ENST00000516792 115 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 RNU2-46P-201ENST00000517038 113 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AL356432.3-201ENST00000568952 465 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 MIR3682-201ENST00000581338 84 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AC011451.2-201ENST00000604303 598 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AL021997.1-201ENST00000605757 193 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 BX664608.1-201ENST00000610519 487 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 MIR7851-201ENST00000610611 160 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AC091834.1-201ENST00000614543 472 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 PISRT1-201ENST00000626175 531 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 Y_RNA.3-201ENST00000362331 103 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 RNU6-114P-201ENST00000384704 105 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 Z92545.1-201ENST00000411782 234 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 SPA17P1-201ENST00000416656 452 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 AC099677.1-201ENST00000420575 175 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 RPL21P109-201ENST00000422213 475 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 AL589872.1-201ENST00000426602 288 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 CYCSP32-201ENST00000440548 321 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 AC010655.1-201ENST00000449336 292 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 RBMY2UP-201ENST00000453474 324 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 AC008155.2-201ENST00000464337 397 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 AC091133.4-201ENST00000511142 308 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 Y_RNA.672-201ENST00000516289 104 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 SCARNA13-201ENST00000516672 275 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 MTCO2P4-201ENST00000517968 247 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 AP003181.2-201ENST00000528941 181 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 AC123904.2-201ENST00000548059 300 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 AC137800.2-201ENST00000574375 120 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 DEFB131E-202ENST00000602581 683 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 AC098614.4-201ENST00000607601 462 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 AC108747.1-201ENST00000609508 535 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 MIR8058-201ENST00000615737 89 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 AC010149.2-201ENST00000637608 315 ntBASIC3.87□□□□□ -1.79
VPS52Q8N1B4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS52Q8N1B4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS52Q8N1B4 AL138713.1-201ENST00000624026 2130 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS52Q8N1B4 GNG5P1-201ENST00000255500 204 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 RNU6-1155P-201ENST00000363554 107 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 RNU1-33P-201ENST00000364249 162 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS52Q8N1B4 RNU6-259P-201ENST00000383999 107 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 MIR591-201ENST00000385290 95 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
VPS52Q8N1B4 AF274854.1-201ENST00000413236 615 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 C1DP2-201ENST00000418167 426 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS52Q8N1B4 AC073614.1-201ENST00000438690 650 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS52Q8N1B4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS52Q8N1B4 MTND1P3-201ENST00000484956 952 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 AC105252.1-201ENST00000503089 286 ntBASIC3.86□□□□□ -1.79
VPS52Q8N1B4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms