Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC106028.5-201ENST00000610332 395 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 PART1_2.1-201ENST00000612397 250 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 AC243773.3-201ENST00000613270 256 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 AL365361.1-201ENST00000566942 3481 ntBASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 AC091390.3-201ENST00000426478 338 ntBASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 AC017037.2-201ENST00000513850 890 ntBASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 RNY4P37-201ENST00000516225 96 ntBASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 OR10V3P-201ENST00000525712 725 ntBASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 AC080013.4-201ENST00000607624 649 ntBASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 AL596245.1-201ENST00000618994 362 ntBASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 AC009269.6-201ENST00000621778 588 ntBASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
CCDC65Q8IXS2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 AC062016.1-201ENST00000355719 319 ntBASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 SNORA67.1-201ENST00000364749 141 ntBASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 SNORD116-12-201ENST00000384468 92 ntBASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 MIR196B-201ENST00000384852 84 ntBASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 AL590084.1-201ENST00000407885 387 ntBASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 RNA5SP184-201ENST00000411071 108 ntBASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 BEND7P1-201ENST00000422058 457 ntBASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 AC073901.1-201ENST00000462471 408 ntBASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 AC109464.2-201ENST00000510242 943 ntBASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 MTCO1P47-201ENST00000523889 1271 ntBASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 HMGB1P6-201ENST00000569046 646 ntBASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 AC008739.2-201ENST00000597006 317 ntBASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 AL160281.1-201ENST00000605307 311 ntBASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 AL390208.1-201ENST00000605885 644 ntBASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 AC245517.5-201ENST00000611529 162 ntBASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC65Q8IXS2 ZNF271P-202ENST00000465539 1970 ntBASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 MIR493-201ENST00000385254 89 ntBASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 TPMTP2-201ENST00000414372 726 ntBASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 RNF2P1-201ENST00000442955 1010 ntBASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 AL109741.2-201ENST00000455561 343 ntBASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 AC114981.1-201ENST00000503897 678 ntBASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 MTND3P3-201ENST00000505004 126 ntBASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 AC022861.1-201ENST00000522981 663 ntBASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 AP005205.1-201ENST00000563503 508 ntBASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 AL356575.1-201ENST00000603008 283 ntBASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 AL158050.2-201ENST00000605336 568 ntBASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 Z82209.1-201ENST00000422141 2135 ntBASIC2.8□□□□□ -1.96
CCDC65Q8IXS2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 SNORA5B-201ENST00000363786 132 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 MIR27B-201ENST00000385129 97 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 TAS2R15P-201ENST00000390674 928 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 U3.26-201ENST00000391236 204 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms